Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228313

Identifier: 21228313

GI number: 21228313

Start: 2630338

End: 2632047

Strand: Direct

Name: 21228313

Synonym: MM_2211

Alternate gene names: NA

Gene position: 2630338-2632047 (Clockwise)

Preceding gene: 21228311

Following gene: 21228314

Centisome position: 64.21

GC content: 33.04

Gene sequence:

>1710_bases
TTGTTCTATATTCATTCATTTGGGGTTAATGTTCCATTTCTGGATCAATGGAATGAGTTTCCGGCATTTTTGATGAAATA
TGAAAACTCTGATTTAAGTATTTTTGACTTATTTAGTCAGCAAAATGAGAGCAGACCGTTTTTTCCTCGTATATTTATGT
TTTCCATGTCTTTAATCACTAGCTATAATGTAAAAAGTTTGATGTATTTATCATATGGATTCTACTGTATTTCTTTCTTT
ATATTATTCTCCATGTATAAAAAAGACCATGGGGTTACGAAACTATCATTATTGAAGTTCGTTCCCATTGCATGGTTCTT
CTTTAACCTGTTCCAGATGAGTAATTTCCTTTTTGGCATTAGAACCGAGCAGTCTTTGCATATTCTCGCATTCATTTCAG
CAGTGTACCTTATAGATTCGAGTAAAAAGTTTGATAGTAAATTTTTAGCTTCTATAGGTTTTGCGTTCGTTTCGCTATTT
TCATTCGCAGCGGGCACGATTACATGGATTGTTTGTCTGGTTCAGGTTGTCCTAAGCAATTCTGACGAGAAGATCAAAAA
AACAGTTGTCTGGATAACGTGTACTGCTGTCTCTTTTTCAGTTTATCTTTTCGGTTATGCAAAACCCTCACACCATCCCT
CACTCTTATATTCTCTTTATAATTTAGAAGATGGAGTTTCAACTTTTCTTAATTCCGTTGGATCTACTATAATTAGAGAC
CCTGTTTTATCTCCAATTGTAGGTTTGCTGATCATTACTATTTTAGTTTTTATTTTTATTGTGAATAGAAAAAATCTTCA
ATTGGAGAAAAACTCAAAATGGTTTTCTTTAGTACTATTTTCTCTTTTTGCATCACTCGAAGTATCAGTGGCAAGAGCCG
GATTTGGATCATCTGTTGCTTTATCGCAAAGATATCTTTTACTCACGTACTGGAGTATAATCGGGTTATATTTCATATCT
CTAAATTTCGTAAACATATATTGTCGAAACTTTCAAATTGTGCCTGACCGTTTTTCTGCAAAAGATATAATTGAGAAAAC
AAAAATCCTTAATTATTTACTTTTAGGGAGCGTACTTTGCTTACTTTTTATAGGGGTCTCTTATCATTTTGTAACAGGGA
TTGAGACAGGATCAGTTTTAAATGAACAATTTGAACAGAATAAATACTACTTGGAAACTTTTGATCTGCAACCCGATAAA
AATTTAGAACGACTTTACCCAGATGCTACTGCAGTTAGAGAAAAAGCCACTTTATTAAGAAAATATAATCTCAGTGTTTT
TTCCCAGGAGAAATATGATTTAGAGGCATTGAAAAAAAAAGATAAGGAACCGCAATATTCTGTGGACAGCATTAATGGGC
AACAGGTTAATTTGATCAAAGATAAGACAGTTAATATTGCTATAACTAGTACTGAAACTGATGAAATAGTAATTGAAGGT
TGGGCTGTAGATGTCGATGAAAATAAGCTAGCGAGGGCTGTTTTCATTGTAGTCAATGACAAAATAACTGTCCCTTCGAG
ATATGGAATTAAAAGAGAAGATTTGATAAATAATTTAAATAACAAAGACTTCCTTAAAGCGGGATTTAGAGCCTCTTTTA
ATCCTTCACTATTAGGAGATGGCACTCACAGAATCAAAATTGCAGTTGTTTCAAATGATGGAACTAGCTACTGTATTGGA
CAGAAAAACGAATACAACTTATACGTCTAA

Upstream 100 bases:

>100_bases
CAAAATGATTAGCCATACTGACGTTCCTATAAAAAAGGCTTTATCAGCAGTTACTTCTCCTTCAATACTAACACTGATTC
TTTTGCCAATAATAATTGGA

Downstream 100 bases:

>100_bases
TTTGTACCCAATTGGAGAAAAGTCCTGAGTTGATTTTAATAAACTAATCCCAAAACTCAAAATTATTTCTCTGAATCCTG
TATTCTGAATAATCAATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MFYIHSFGVNVPFLDQWNEFPAFLMKYENSDLSIFDLFSQQNESRPFFPRIFMFSMSLITSYNVKSLMYLSYGFYCISFF
ILFSMYKKDHGVTKLSLLKFVPIAWFFFNLFQMSNFLFGIRTEQSLHILAFISAVYLIDSSKKFDSKFLASIGFAFVSLF
SFAAGTITWIVCLVQVVLSNSDEKIKKTVVWITCTAVSFSVYLFGYAKPSHHPSLLYSLYNLEDGVSTFLNSVGSTIIRD
PVLSPIVGLLIITILVFIFIVNRKNLQLEKNSKWFSLVLFSLFASLEVSVARAGFGSSVALSQRYLLLTYWSIIGLYFIS
LNFVNIYCRNFQIVPDRFSAKDIIEKTKILNYLLLGSVLCLLFIGVSYHFVTGIETGSVLNEQFEQNKYYLETFDLQPDK
NLERLYPDATAVREKATLLRKYNLSVFSQEKYDLEALKKKDKEPQYSVDSINGQQVNLIKDKTVNIAITSTETDEIVIEG
WAVDVDENKLARAVFIVVNDKITVPSRYGIKREDLINNLNNKDFLKAGFRASFNPSLLGDGTHRIKIAVVSNDGTSYCIG
QKNEYNLYV

Sequences:

>Translated_569_residues
MFYIHSFGVNVPFLDQWNEFPAFLMKYENSDLSIFDLFSQQNESRPFFPRIFMFSMSLITSYNVKSLMYLSYGFYCISFF
ILFSMYKKDHGVTKLSLLKFVPIAWFFFNLFQMSNFLFGIRTEQSLHILAFISAVYLIDSSKKFDSKFLASIGFAFVSLF
SFAAGTITWIVCLVQVVLSNSDEKIKKTVVWITCTAVSFSVYLFGYAKPSHHPSLLYSLYNLEDGVSTFLNSVGSTIIRD
PVLSPIVGLLIITILVFIFIVNRKNLQLEKNSKWFSLVLFSLFASLEVSVARAGFGSSVALSQRYLLLTYWSIIGLYFIS
LNFVNIYCRNFQIVPDRFSAKDIIEKTKILNYLLLGSVLCLLFIGVSYHFVTGIETGSVLNEQFEQNKYYLETFDLQPDK
NLERLYPDATAVREKATLLRKYNLSVFSQEKYDLEALKKKDKEPQYSVDSINGQQVNLIKDKTVNIAITSTETDEIVIEG
WAVDVDENKLARAVFIVVNDKITVPSRYGIKREDLINNLNNKDFLKAGFRASFNPSLLGDGTHRIKIAVVSNDGTSYCIG
QKNEYNLYV
>Mature_569_residues
MFYIHSFGVNVPFLDQWNEFPAFLMKYENSDLSIFDLFSQQNESRPFFPRIFMFSMSLITSYNVKSLMYLSYGFYCISFF
ILFSMYKKDHGVTKLSLLKFVPIAWFFFNLFQMSNFLFGIRTEQSLHILAFISAVYLIDSSKKFDSKFLASIGFAFVSLF
SFAAGTITWIVCLVQVVLSNSDEKIKKTVVWITCTAVSFSVYLFGYAKPSHHPSLLYSLYNLEDGVSTFLNSVGSTIIRD
PVLSPIVGLLIITILVFIFIVNRKNLQLEKNSKWFSLVLFSLFASLEVSVARAGFGSSVALSQRYLLLTYWSIIGLYFIS
LNFVNIYCRNFQIVPDRFSAKDIIEKTKILNYLLLGSVLCLLFIGVSYHFVTGIETGSVLNEQFEQNKYYLETFDLQPDK
NLERLYPDATAVREKATLLRKYNLSVFSQEKYDLEALKKKDKEPQYSVDSINGQQVNLIKDKTVNIAITSTETDEIVIEG
WAVDVDENKLARAVFIVVNDKITVPSRYGIKREDLINNLNNKDFLKAGFRASFNPSLLGDGTHRIKIAVVSNDGTSYCIG
QKNEYNLYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65123; Mature: 65123

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYIHSFGVNVPFLDQWNEFPAFLMKYENSDLSIFDLFSQQNESRPFFPRIFMFSMSLIT
CEEEEECCCCCCCHHCCCCCCHHHEEECCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHH
SYNVKSLMYLSYGFYCISFFILFSMYKKDHGVTKLSLLKFVPIAWFFFNLFQMSNFLFGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
RTEQSLHILAFISAVYLIDSSKKFDSKFLASIGFAFVSLFSFAAGTITWIVCLVQVVLSN
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDEKIKKTVVWITCTAVSFSVYLFGYAKPSHHPSLLYSLYNLEDGVSTFLNSVGSTIIRD
CCHHHEEEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHHH
PVLSPIVGLLIITILVFIFIVNRKNLQLEKNSKWFSLVLFSLFASLEVSVARAGFGSSVA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LSQRYLLLTYWSIIGLYFISLNFVNIYCRNFQIVPDRFSAKDIIEKTKILNYLLLGSVLC
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLFIGVSYHFVTGIETGSVLNEQFEQNKYYLETFDLQPDKNLERLYPDATAVREKATLLR
HHHHHHHHHEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHH
KYNLSVFSQEKYDLEALKKKDKEPQYSVDSINGQQVNLIKDKTVNIAITSTETDEIVIEG
HHCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEE
WAVDVDENKLARAVFIVVNDKITVPSRYGIKREDLINNLNNKDFLKAGFRASFNPSLLGD
EEEECCCCCCEEEEEEEEECEEECCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCC
GTHRIKIAVVSNDGTSYCIGQKNEYNLYV
CCEEEEEEEEECCCCEEEECCCCCCEEEC
>Mature Secondary Structure
MFYIHSFGVNVPFLDQWNEFPAFLMKYENSDLSIFDLFSQQNESRPFFPRIFMFSMSLIT
CEEEEECCCCCCCHHCCCCCCHHHEEECCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHH
SYNVKSLMYLSYGFYCISFFILFSMYKKDHGVTKLSLLKFVPIAWFFFNLFQMSNFLFGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
RTEQSLHILAFISAVYLIDSSKKFDSKFLASIGFAFVSLFSFAAGTITWIVCLVQVVLSN
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDEKIKKTVVWITCTAVSFSVYLFGYAKPSHHPSLLYSLYNLEDGVSTFLNSVGSTIIRD
CCHHHEEEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHHH
PVLSPIVGLLIITILVFIFIVNRKNLQLEKNSKWFSLVLFSLFASLEVSVARAGFGSSVA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LSQRYLLLTYWSIIGLYFISLNFVNIYCRNFQIVPDRFSAKDIIEKTKILNYLLLGSVLC
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLFIGVSYHFVTGIETGSVLNEQFEQNKYYLETFDLQPDKNLERLYPDATAVREKATLLR
HHHHHHHHHEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHH
KYNLSVFSQEKYDLEALKKKDKEPQYSVDSINGQQVNLIKDKTVNIAITSTETDEIVIEG
HHCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEE
WAVDVDENKLARAVFIVVNDKITVPSRYGIKREDLINNLNNKDFLKAGFRASFNPSLLGD
EEEECCCCCCEEEEEEEEECEEECCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCC
GTHRIKIAVVSNDGTSYCIGQKNEYNLYV
CCEEEEEEEEECCCCEEEECCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]