| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228254
Identifier: 21228254
GI number: 21228254
Start: 2555012
End: 2555632
Strand: Direct
Name: 21228254
Synonym: MM_2152
Alternate gene names: NA
Gene position: 2555012-2555632 (Clockwise)
Preceding gene: 21228252
Following gene: 21228255
Centisome position: 62.37
GC content: 47.5
Gene sequence:
>621_bases TTGGTTACAGAGACATTAAAAAAGCAAATTGACCGGTTCCTTCTGGCTTTCGGTTTTTCCCTTATGTTCGGGATAATGCT CCTTGGGCAGGAATTCAGGCAGGCTGTAGGAGAAGCAGTAGGGATCTTTATGGACCCCGTTCTCATGCTGGTCGGGGAGC AGAACTTCCATCTGATCCTTTTAGTCATGGCTGCCATCACTGCCATTTATGCATCCCTTATCCAGAAGTATACCATGGAC TGGGACCTGATGAGGAATACTCAGGAGCGCATGAAGGTTTTCCAGAAAGAGTTCCGGGAGGCACAGCTTTCCCAGAATAC ATATATGCTGAAAAAACTTGAAGACCAGCGTAAAGAGATGATGGAAGACCAGATGAAGATGTCCAAGCAGCAGTTCAAGC CCATGGCTTATATAAGTATTATCTCCCTGCCTCTCTTCATGTGGGCTTATTATTTCATCAGCGGGCACGAAGCGGCTACC ATGGTCTTTCCTTTCTGGGGTGAGCAGCTTCTGACCACTTCAGCTATTGGTCCTTTCCAGCACTGGATCTACTGGTACTT CATCTCCTCTCTTGGAGTCAGCCAGCTTGTCAGGAAAGCTCTTAATATCGGTGGGGTCTGA
Upstream 100 bases:
>100_bases AAATCATTTTCGGGATTTATTCGTTCAAGCTCATCCGGTAATACTCTCCCGCTTGAAACAATTAAAATTAAATCTATCGA ACCTTAATGGTGAGGACAAC
Downstream 100 bases:
>100_bases TGCAGATCACAGTGAGCGGGCTTCCAGGAAGCGGCACTTCCACTCTCTCAAAGCTCCTTGCTGAGTGTTATGACCTCGAG CTGATTTCTTCGGGGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Adk/Cmk Cluster Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLILLVMAAITAIYASLIQKYTMD WDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEMMEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAAT MVFPFWGEQLLTTSAIGPFQHWIYWYFISSLGVSQLVRKALNIGGV
Sequences:
>Translated_206_residues MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLILLVMAAITAIYASLIQKYTMD WDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEMMEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAAT MVFPFWGEQLLTTSAIGPFQHWIYWYFISSLGVSQLVRKALNIGGV >Mature_206_residues MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLILLVMAAITAIYASLIQKYTMD WDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEMMEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAAT MVFPFWGEQLLTTSAIGPFQHWIYWYFISSLGVSQLVRKALNIGGV
Specific function: Unknown
COG id: COG1422
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24053; Mature: 24053
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LVMAAITAIYASLIQKYTMDWDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEM HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAATMVFPFWGEQLLTTSAIGPFQ HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHCCCHHH HWIYWYFISSLGVSQLVRKALNIGGV HHHHHHHHHHHCHHHHHHHHHHCCCC >Mature Secondary Structure MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LVMAAITAIYASLIQKYTMDWDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEM HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAATMVFPFWGEQLLTTSAIGPFQ HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHCCCHHH HWIYWYFISSLGVSQLVRKALNIGGV HHHHHHHHHHHCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA