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The map label for this gene is rpl15p [H]

Identifier: 21228248

GI number: 21228248

Start: 2549563

End: 2549985

Strand: Direct

Name: rpl15p [H]

Synonym: MM_2146

Alternate gene names: 21228248

Gene position: 2549563-2549985 (Clockwise)

Preceding gene: 21228247

Following gene: 21228249

Centisome position: 62.24

GC content: 49.65

Gene sequence:

>423_bases
ATGGATATTAAGAAGTTCAGAGGGTCCAGGACCTGCGGAGGCGGGACCCATAAAAACAGGCGTGGAGCCGGAAACCGCGG
AGGCCGTGGAAAAGCCGGTGGCTGCAAACACCACTTCGTAAGAGCTATGATGCGTGGATACAGCTACGGAAAGCACGGTT
TCAAGCGCCCTGTTGAAGTTTCAAAGGACATTTCAATAGTAAATGTTGGAGAACTTGACGAACTTGCTCCCTATCTTGTT
GAAGAAGGGCTTGCAGAAGTTAAGGATGGAGCATACCACATTAACCTTGAAAACCTCGGAATCGAGAAGGTCCTTGGAAG
CGGACGTGTCACAAAGAACCTTGTGGTCACTTCAGAGGAGTTTTCCGCGTCTGCCCGCGAAAAAATCGAAAATGCTGGCG
GAAGCTGCATCGATGCAGAATAA

Upstream 100 bases:

>100_bases
CATGCAGGGATTAAGAGGACAGTCCAGCAGGGCGGCGTACTCGGAAACCACGAAGAAAATATCAACGTGCTCCTGCACAA
GATGAGATAAGGTGGTTTAA

Downstream 100 bases:

>100_bases
GTAGTGTCATCTCGACCCTACTTATTTCATTCTTTTAGTAACTTTTTATATTAGGTGTGCTATATACCATTATTTTACGG
TAAAAGCATAATCTAATATT

Product: 50S ribosomal protein L15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDIKKFRGSRTCGGGTHKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYSYGKHGFKRPVEVSKDISIVNVGELDELAPYLV
EEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVVTSEEFSASAREKIENAGGSCIDAE

Sequences:

>Translated_140_residues
MDIKKFRGSRTCGGGTHKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYSYGKHGFKRPVEVSKDISIVNVGELDELAPYLV
EEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVVTSEEFSASAREKIENAGGSCIDAE
>Mature_140_residues
MDIKKFRGSRTCGGGTHKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYSYGKHGFKRPVEVSKDISIVNVGELDELAPYLV
EEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVVTSEEFSASAREKIENAGGSCIDAE

Specific function: Binds to the 23S rRNA [H]

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001196
- InterPro:   IPR021131 [H]

Pfam domain/function: PF00828 Ribosomal_L18e [H]

EC number: NA

Molecular weight: Translated: 15093; Mature: 15093

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKKFRGSRTCGGGTHKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYSYGKHGFKRPVEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
SKDISIVNVGELDELAPYLVEEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVVTSEE
CCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHCCCCCCCEEEEECHH
FSASAREKIENAGGSCIDAE
HHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MDIKKFRGSRTCGGGTHKNRRGAGNRGGRGKAGGCKHHFVRAMMRGYSYGKHGFKRPVEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
SKDISIVNVGELDELAPYLVEEGLAEVKDGAYHINLENLGIEKVLGSGRVTKNLVVTSEE
CCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHCCCCCCCEEEEECHH
FSASAREKIENAGGSCIDAE
HHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]