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The map label for this gene is rpl30p [H]

Identifier: 21228247

GI number: 21228247

Start: 2549091

End: 2549552

Strand: Direct

Name: rpl30p [H]

Synonym: MM_2145

Alternate gene names: 21228247

Gene position: 2549091-2549552 (Clockwise)

Preceding gene: 21228246

Following gene: 21228248

Centisome position: 62.23

GC content: 48.48

Gene sequence:

>462_bases
ATGTATGCAGTTGTGAGACTGAGAGGTCAGGTCAACGTTCGCTATACCATTGAGGATACTATGAAGATGCTCCGCCTGCA
CAAAGTTAACCACTGTGTGTTCTTGCCGGAGAATCCTCACTACAAGGGCATGGTCCAGAAAGTAAAGGACTACGTTGCAT
ACGGAAAGATTGATGCAAAGACTCTTGCAGAAGTCCTTGAAAACCGTGGAAGGCTTGAAGGCGACGCTCGCCTTACAGAA
GAATACATCCGTGAAAACACGGACTATGATTCCATAAAGGCCTTCGCAGAAGCAGTTGTCGAGGGAAAAGCTTCCCTTAA
GGACGTCCCCAAACTGAAACCTGTATTCAGGCTTCACCCGCCCAGAAAAGGGCATGCAGGGATTAAGAGGACAGTCCAGC
AGGGCGGCGTACTCGGAAACCACGAAGAAAATATCAACGTGCTCCTGCACAAGATGAGATAA

Upstream 100 bases:

>100_bases
ACCAGGTCTACCCTCAACTTCGCAAAGGCTACATATGATGCCCTCAATCAGGTCAATGTCGTAAGACTGCCTGTGTACTA
CGGTAAGGAGGAAATCTGAG

Downstream 100 bases:

>100_bases
GGTGGTTTAAATGGATATTAAGAAGTTCAGAGGGTCCAGGACCTGCGGAGGCGGGACCCATAAAAACAGGCGTGGAGCCG
GAAACCGCGGAGGCCGTGGA

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MYAVVRLRGQVNVRYTIEDTMKMLRLHKVNHCVFLPENPHYKGMVQKVKDYVAYGKIDAKTLAEVLENRGRLEGDARLTE
EYIRENTDYDSIKAFAEAVVEGKASLKDVPKLKPVFRLHPPRKGHAGIKRTVQQGGVLGNHEENINVLLHKMR

Sequences:

>Translated_153_residues
MYAVVRLRGQVNVRYTIEDTMKMLRLHKVNHCVFLPENPHYKGMVQKVKDYVAYGKIDAKTLAEVLENRGRLEGDARLTE
EYIRENTDYDSIKAFAEAVVEGKASLKDVPKLKPVFRLHPPRKGHAGIKRTVQQGGVLGNHEENINVLLHKMR
>Mature_153_residues
MYAVVRLRGQVNVRYTIEDTMKMLRLHKVNHCVFLPENPHYKGMVQKVKDYVAYGKIDAKTLAEVLENRGRLEGDARLTE
EYIRENTDYDSIKAFAEAVVEGKASLKDVPKLKPVFRLHPPRKGHAGIKRTVQQGGVLGNHEENINVLLHKMR

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR018038
- InterPro:   IPR016082 [H]

Pfam domain/function: PF00327 Ribosomal_L30 [H]

EC number: NA

Molecular weight: Translated: 17549; Mature: 17549

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAVVRLRGQVNVRYTIEDTMKMLRLHKVNHCVFLPENPHYKGMVQKVKDYVAYGKIDAK
CEEEEEECCCEEEEEEHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHH
TLAEVLENRGRLEGDARLTEEYIRENTDYDSIKAFAEAVVEGKASLKDVPKLKPVFRLHP
HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCEEECC
PRKGHAGIKRTVQQGGVLGNHEENINVLLHKMR
CCCCCHHHHHHHHHCCCCCCCCCCHHHHEEECC
>Mature Secondary Structure
MYAVVRLRGQVNVRYTIEDTMKMLRLHKVNHCVFLPENPHYKGMVQKVKDYVAYGKIDAK
CEEEEEECCCEEEEEEHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHH
TLAEVLENRGRLEGDARLTEEYIRENTDYDSIKAFAEAVVEGKASLKDVPKLKPVFRLHP
HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCEEECC
PRKGHAGIKRTVQQGGVLGNHEENINVLLHKMR
CCCCCHHHHHHHHHCCCCCCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]