Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228124

Identifier: 21228124

GI number: 21228124

Start: 2414777

End: 2415394

Strand: Direct

Name: 21228124

Synonym: MM_2022

Alternate gene names: NA

Gene position: 2414777-2415394 (Clockwise)

Preceding gene: 21228123

Following gene: 21228127

Centisome position: 58.95

GC content: 44.34

Gene sequence:

>618_bases
ATGATGTTTGCAACGATAGGTGCGTCTTTTCATAAAGGCTGGAGAGCAGGGCCTTCGATTTTCATGGGGCATGCCCTTGT
GGAATGCATTTTGTTCATGCTTATTCTCATAGGCGCGTCATCTTTTCTCAGGCAGTCAATTATCTCCTATCTGTCTATTG
TAGGCGGCTTTGTAATGGTAGCATTCGGGCTTCTAATGATTAAAAAAGCAAAAGAAGCCTCCACAATGGATGTCTCTATT
TCGGCCAGCAGCCTGAACCTTTCCTCTGGTTCCATGTCTTCAGGGATCATAACCTCAGCCTTAAACCCTTTTTCGAGCAC
GGTCTCAGCAGGAATTATAACTTCAGCGTTGAATCCTTTCTTTGTTGCCTGGTGGTTGACAGCAGGCAGTGCAATTATTC
TTCAGGAATATCTGGCAGGCATTCTTTCAGTCCTTGCATTTATTATCGGGCACTGGATAGCAGACTTTGGTTTTCTTCTA
ACCGTCTCATCCTCTTTTTCCAGAGGAACGGAAATAATTTCACAGCCCACACACCAGAAGCTGGTATACCTGTGCGGAGG
ATTTATGTCATTCATCGGCCTGTGGTTTATGATTAACAACAATAGTGTCCTGCAATGA

Upstream 100 bases:

>100_bases
TATTTTAAGATCCATTCCGGGTGGGACTATAATCGAATTAATCAAAGCTCTTGTTTTCGGCTTCACTGTAGGCATATCTG
CAGCCATTATTCCTGGGCCC

Downstream 100 bases:

>100_bases
TTATTTTCAGGTTAAAAACAGGTATGTTAAAAATCATGCATATTAAGTTATGGAATGTGAGGTATTCTGTCTGTGAAACG
AATTATGTACTGAAAAAAGG

Product: amino acid transporter LysE

Products: NA

Alternate protein names: Lysine Exporter Protein; Amino Acid Transporter LysE; Transporter Protein

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMVAFGLLMIKKAKEASTMDVSI
SASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPFFVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLL
TVSSSFSRGTEIISQPTHQKLVYLCGGFMSFIGLWFMINNNSVLQ

Sequences:

>Translated_205_residues
MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMVAFGLLMIKKAKEASTMDVSI
SASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPFFVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLL
TVSSSFSRGTEIISQPTHQKLVYLCGGFMSFIGLWFMINNNSVLQ
>Mature_205_residues
MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMVAFGLLMIKKAKEASTMDVSI
SASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPFFVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLL
TVSSSFSRGTEIISQPTHQKLVYLCGGFMSFIGLWFMINNNSVLQ

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21959; Mature: 21959

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMV
CEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFGLLMIKKAKEASTMDVSISASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPF
HHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
FVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLLTVSSSFSRGTEIISQPTHQK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHH
LVYLCGGFMSFIGLWFMINNNSVLQ
HHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMV
CEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AFGLLMIKKAKEASTMDVSISASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPF
HHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
FVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLLTVSSSFSRGTEIISQPTHQK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHH
LVYLCGGFMSFIGLWFMINNNSVLQ
HHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA