| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228124
Identifier: 21228124
GI number: 21228124
Start: 2414777
End: 2415394
Strand: Direct
Name: 21228124
Synonym: MM_2022
Alternate gene names: NA
Gene position: 2414777-2415394 (Clockwise)
Preceding gene: 21228123
Following gene: 21228127
Centisome position: 58.95
GC content: 44.34
Gene sequence:
>618_bases ATGATGTTTGCAACGATAGGTGCGTCTTTTCATAAAGGCTGGAGAGCAGGGCCTTCGATTTTCATGGGGCATGCCCTTGT GGAATGCATTTTGTTCATGCTTATTCTCATAGGCGCGTCATCTTTTCTCAGGCAGTCAATTATCTCCTATCTGTCTATTG TAGGCGGCTTTGTAATGGTAGCATTCGGGCTTCTAATGATTAAAAAAGCAAAAGAAGCCTCCACAATGGATGTCTCTATT TCGGCCAGCAGCCTGAACCTTTCCTCTGGTTCCATGTCTTCAGGGATCATAACCTCAGCCTTAAACCCTTTTTCGAGCAC GGTCTCAGCAGGAATTATAACTTCAGCGTTGAATCCTTTCTTTGTTGCCTGGTGGTTGACAGCAGGCAGTGCAATTATTC TTCAGGAATATCTGGCAGGCATTCTTTCAGTCCTTGCATTTATTATCGGGCACTGGATAGCAGACTTTGGTTTTCTTCTA ACCGTCTCATCCTCTTTTTCCAGAGGAACGGAAATAATTTCACAGCCCACACACCAGAAGCTGGTATACCTGTGCGGAGG ATTTATGTCATTCATCGGCCTGTGGTTTATGATTAACAACAATAGTGTCCTGCAATGA
Upstream 100 bases:
>100_bases TATTTTAAGATCCATTCCGGGTGGGACTATAATCGAATTAATCAAAGCTCTTGTTTTCGGCTTCACTGTAGGCATATCTG CAGCCATTATTCCTGGGCCC
Downstream 100 bases:
>100_bases TTATTTTCAGGTTAAAAACAGGTATGTTAAAAATCATGCATATTAAGTTATGGAATGTGAGGTATTCTGTCTGTGAAACG AATTATGTACTGAAAAAAGG
Product: amino acid transporter LysE
Products: NA
Alternate protein names: Lysine Exporter Protein; Amino Acid Transporter LysE; Transporter Protein
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMVAFGLLMIKKAKEASTMDVSI SASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPFFVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLL TVSSSFSRGTEIISQPTHQKLVYLCGGFMSFIGLWFMINNNSVLQ
Sequences:
>Translated_205_residues MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMVAFGLLMIKKAKEASTMDVSI SASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPFFVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLL TVSSSFSRGTEIISQPTHQKLVYLCGGFMSFIGLWFMINNNSVLQ >Mature_205_residues MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMVAFGLLMIKKAKEASTMDVSI SASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPFFVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLL TVSSSFSRGTEIISQPTHQKLVYLCGGFMSFIGLWFMINNNSVLQ
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21959; Mature: 21959
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMV CEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AFGLLMIKKAKEASTMDVSISASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPF HHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH FVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLLTVSSSFSRGTEIISQPTHQK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHH LVYLCGGFMSFIGLWFMINNNSVLQ HHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MMFATIGASFHKGWRAGPSIFMGHALVECILFMLILIGASSFLRQSIISYLSIVGGFVMV CEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AFGLLMIKKAKEASTMDVSISASSLNLSSGSMSSGIITSALNPFSSTVSAGIITSALNPF HHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH FVAWWLTAGSAIILQEYLAGILSVLAFIIGHWIADFGFLLTVSSSFSRGTEIISQPTHQK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHH LVYLCGGFMSFIGLWFMINNNSVLQ HHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA