Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228123

Identifier: 21228123

GI number: 21228123

Start: 2413393

End: 2414250

Strand: Direct

Name: 21228123

Synonym: MM_2021

Alternate gene names: NA

Gene position: 2413393-2414250 (Clockwise)

Preceding gene: 21228122

Following gene: 21228124

Centisome position: 58.92

GC content: 44.17

Gene sequence:

>858_bases
TTGAGTAAAGCATATCAGGCAGAACCCGAAATAAGGGAAGATCTGCAGGGGAGAATAGAGGTCTTTGACCAGAATATCAG
AAGTTTTGAAAAGCGGCTGAGGGCAATTGAACGCCGCCTATCTCTTGAAGCGCCTCAAAATTTACAGGCTGGAAAAGCCC
ATCCGGGGGTTTCTTCAGACTCTTTTCAGGAAGTAACTTCTGCAAAGCTCGTAGCCGGCACTTCGATTACTCCGCTGGGT
CCTTCTATTTCTCCTGAAGCTCCTTTTTCTCATCAGGGCAGTTCTTTACTTTCAGATTCTGCTCCGTTAATAACACAGGA
GAGCACTTCGAATTTTGCCTTCTGTTCTGCACTCCCTTCTTCAGAATCTTCGGAAGCTTCCATGATTTCACTTGATAGCT
CATCCGAAGTCTCAGGAGTCGTTTACAGAATAAAAGAAATAAGTACTCTTTTTTCCAGCCTCTCTGAAAGCCTTCATACT
TTACAGGCTGCAATATCCGAACTTTCCGGTTTTGTGCATGAAAACCTTGATCCCGAGGTTAAAAGACTTGAGGGCGAGAT
CCAGAATATGAAATGCCAGGAAAATGCTTCGGAAGAATATATACGAAAACTCGAATCACGTATTGAATTCCTTGAAAACC
GTGACAGGTTTACACTGGGTTCCATAAAAGTCCCGGTAGAAATCTCAGGAATCGCCGGATCTTCAGTCCTTTTTCTTACA
GGGATTCTTATCCTGTCCGGCCGATGGGATATAATAAGGTCGCCTTACTTCTCAATCGGGCTTGCGGTAATTATGGCAGG
GGCTGTAATTTTAAAGTTTTCCATGGTCAACCGGGAACAAAAGTCCCTGACGCATTAA

Upstream 100 bases:

>100_bases
TTTTAATTATATTTTTCTACTTTCTGTCCTATCATCAAAAAATTTATATACAGTTTGCATGAGATTTCATAGTAGAAATT
TTTTGGGGGTTATGGTTCTA

Downstream 100 bases:

>100_bases
TTTGAAAACAGATTACGGACATCAATTACCTCTTCCGGTCATTAACGGATAAATAGGTTAATAAATCGGTAAATAGACCT
CGGAATATATGGAATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSKAYQAEPEIREDLQGRIEVFDQNIRSFEKRLRAIERRLSLEAPQNLQAGKAHPGVSSDSFQEVTSAKLVAGTSITPLG
PSISPEAPFSHQGSSLLSDSAPLITQESTSNFAFCSALPSSESSEASMISLDSSSEVSGVVYRIKEISTLFSSLSESLHT
LQAAISELSGFVHENLDPEVKRLEGEIQNMKCQENASEEYIRKLESRIEFLENRDRFTLGSIKVPVEISGIAGSSVLFLT
GILILSGRWDIIRSPYFSIGLAVIMAGAVILKFSMVNREQKSLTH

Sequences:

>Translated_285_residues
MSKAYQAEPEIREDLQGRIEVFDQNIRSFEKRLRAIERRLSLEAPQNLQAGKAHPGVSSDSFQEVTSAKLVAGTSITPLG
PSISPEAPFSHQGSSLLSDSAPLITQESTSNFAFCSALPSSESSEASMISLDSSSEVSGVVYRIKEISTLFSSLSESLHT
LQAAISELSGFVHENLDPEVKRLEGEIQNMKCQENASEEYIRKLESRIEFLENRDRFTLGSIKVPVEISGIAGSSVLFLT
GILILSGRWDIIRSPYFSIGLAVIMAGAVILKFSMVNREQKSLTH
>Mature_284_residues
SKAYQAEPEIREDLQGRIEVFDQNIRSFEKRLRAIERRLSLEAPQNLQAGKAHPGVSSDSFQEVTSAKLVAGTSITPLGP
SISPEAPFSHQGSSLLSDSAPLITQESTSNFAFCSALPSSESSEASMISLDSSSEVSGVVYRIKEISTLFSSLSESLHTL
QAAISELSGFVHENLDPEVKRLEGEIQNMKCQENASEEYIRKLESRIEFLENRDRFTLGSIKVPVEISGIAGSSVLFLTG
ILILSGRWDIIRSPYFSIGLAVIMAGAVILKFSMVNREQKSLTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31215; Mature: 31083

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAYQAEPEIREDLQGRIEVFDQNIRSFEKRLRAIERRLSLEAPQNLQAGKAHPGVSSD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
SFQEVTSAKLVAGTSITPLGPSISPEAPFSHQGSSLLSDSAPLITQESTSNFAFCSALPS
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCEEEEECCCC
SESSEASMISLDSSSEVSGVVYRIKEISTLFSSLSESLHTLQAAISELSGFVHENLDPEV
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KRLEGEIQNMKCQENASEEYIRKLESRIEFLENRDRFTLGSIKVPVEISGIAGSSVLFLT
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHH
GILILSGRWDIIRSPYFSIGLAVIMAGAVILKFSMVNREQKSLTH
HHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
SKAYQAEPEIREDLQGRIEVFDQNIRSFEKRLRAIERRLSLEAPQNLQAGKAHPGVSSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
SFQEVTSAKLVAGTSITPLGPSISPEAPFSHQGSSLLSDSAPLITQESTSNFAFCSALPS
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCEEEEECCCC
SESSEASMISLDSSSEVSGVVYRIKEISTLFSSLSESLHTLQAAISELSGFVHENLDPEV
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KRLEGEIQNMKCQENASEEYIRKLESRIEFLENRDRFTLGSIKVPVEISGIAGSSVLFLT
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHH
GILILSGRWDIIRSPYFSIGLAVIMAGAVILKFSMVNREQKSLTH
HHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA