| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yhcC [C]
Identifier: 21228076
GI number: 21228076
Start: 2344103
End: 2345770
Strand: Reverse
Name: yhcC [C]
Synonym: MM_1974
Alternate gene names: 21228076
Gene position: 2345770-2344103 (Counterclockwise)
Preceding gene: 21228077
Following gene: 21228075
Centisome position: 57.26
GC content: 47.12
Gene sequence:
>1668_bases ATGACCCTAAAGACGGAATTTGAGATGAAAGAAGCTGATTACAACAGGGCCTGCAGGAACATCCTTGAAAAGGTGCTTGC CGGGGAAATAAAAGACGAAGACCAGTTAAACAAAGTGAAAAAAGATGTGAGTAAGCTGTATCATCTTGCCAGCCTGCCTA GAAATGGGGATATTATTATGCAGGGCACACCTGAGGAGCAGGCTCTAATAAAAGAGTTCCTCAGGAGAAAACCCGTAAGG ACGATTTCCGGAGTCGCGGTAATTGCTGTAATGACCTCTCCTGCCCCATGCCCTCACGGGGTTTGCCTGCCCTGTCCGGG AGGTCCGAATTCCTCATTTAAATCCCCTCAGAGCTACATGGGAAGGGAACCTGCAGCAATGAGAGCAATTCAGCATGAAT TTGACCCTTACTCCCAGGTTCAGTCCAGGCTTTCCCAGCTAAAAGAGATAGGGCATGATGTTGAAAAAGTTGAGCTTATA GTGATGGGAGGCACTTTTTCAGCACGCAGCCTTGACTATCAGGAATGGTTTACCAAACGCTGCCTTGAAGCAATGAACGA TTTTACAGGCATGGAATGGAGGGATAAAGCCTGGACGATCGGAAAGTCCTTGCCTTATGTTCCGCTTGAAGAGGTTCAGA AAGCAAACGAAACAGCTGACATCCGAAACGTTGGCATAACCTTTGAGACAAGACCTGATTGGGCAAGAGAAGAACATGTA GACGAATTCCTCAGGCTTGGAGGGACAAAGGTAGAGATTGGAGTCCAGAGCGTTTATGATTTTGTATTATCCCGGATGCA GAGAGGGCATGGAGTTGCAGAAATTGTCAGAGCTAACAGGGTATTAAGAGACAGTGCATTTAAAGTAGGCTTTCACATGA TGCCTCACCTTCCTGGAGCGGACTCCGAACTTGACCTGAGGGGATTTAAAAAGCTCTTCGATGACCAGCGTTTCAGGCCG GATTACCTGAAAATATATCCTACCCTTGTAACCGAAGGCACCCCCCTGTACAGAATGTGGAAATCCGGAGAATATCAGGC TCTTTCAGACGAAGAAGCTGCAGAACTTGTCGCAGATATAAAGGCTGTCCTGCCTAAATGGGTAAGGCTTCAGCGCATCC AGAGGGATATTCCTGCCCACCAGATCTTTGCAGGCGTGAGGAAAAGTAACCTAAGGCAGCTTGCAGAGGAGAAACTCCGG GAAAAGGGAGGGAAATGCCGCTGCATACGCTGCAGAGAGGTCGGACACAACAGCCTGAAAGGAAGAAGGATAAATGAAAA AGACATCGAGCTTACTGTGGAATCTTACGAAGCCTGTAACGGTAAAGAACACTTCATCGCTTTTGAAGACCTTTCGGCAG ATGTCCTGATAGGTTTTACACGTTTGCGTTTCCCTGCCGAACCTCACAGAGAAGAACTGCAGGGCTCTGCACTTATAAGG GAACTGCATGTTTACGGCTCCATGGTGCCTGTAGGAAAAGGCGCAAAACAAAAAGAATGGCAACACAGGGGTTATGGAAA GGAACTTATTGAACATGCAGAAAAAACGGCATCCGAATCCGGCTACGGCAAGCTTTCTATAATTAGCGGAATAGGCGCAA GGGAATATTATAGGAAACTGGGATACGATCTTGACGGAGTATACATGTCAAAACCCCTGAAGGATTAA
Upstream 100 bases:
>100_bases TAAAAACAGGAATTTAAAATTTATGAATCCCTCCCTGGAACCTGATTACAAGTTCAGGTTAAGGATTTCAGTTGCAGATG CCAATGAAAGAGCCTGGAAT
Downstream 100 bases:
>100_bases AAAATGGAGATATGAAATAACCGGAGACCGGATTTTCCAGCCAGGCAATATATTAACCACCTTGGGCTCTGGAATTCATC CGGAGCCCCAGGTTATTGAG
Product: histone acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MTLKTEFEMKEADYNRACRNILEKVLAGEIKDEDQLNKVKKDVSKLYHLASLPRNGDIIMQGTPEEQALIKEFLRRKPVR TISGVAVIAVMTSPAPCPHGVCLPCPGGPNSSFKSPQSYMGREPAAMRAIQHEFDPYSQVQSRLSQLKEIGHDVEKVELI VMGGTFSARSLDYQEWFTKRCLEAMNDFTGMEWRDKAWTIGKSLPYVPLEEVQKANETADIRNVGITFETRPDWAREEHV DEFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANRVLRDSAFKVGFHMMPHLPGADSELDLRGFKKLFDDQRFRP DYLKIYPTLVTEGTPLYRMWKSGEYQALSDEEAAELVADIKAVLPKWVRLQRIQRDIPAHQIFAGVRKSNLRQLAEEKLR EKGGKCRCIRCREVGHNSLKGRRINEKDIELTVESYEACNGKEHFIAFEDLSADVLIGFTRLRFPAEPHREELQGSALIR ELHVYGSMVPVGKGAKQKEWQHRGYGKELIEHAEKTASESGYGKLSIISGIGAREYYRKLGYDLDGVYMSKPLKD
Sequences:
>Translated_555_residues MTLKTEFEMKEADYNRACRNILEKVLAGEIKDEDQLNKVKKDVSKLYHLASLPRNGDIIMQGTPEEQALIKEFLRRKPVR TISGVAVIAVMTSPAPCPHGVCLPCPGGPNSSFKSPQSYMGREPAAMRAIQHEFDPYSQVQSRLSQLKEIGHDVEKVELI VMGGTFSARSLDYQEWFTKRCLEAMNDFTGMEWRDKAWTIGKSLPYVPLEEVQKANETADIRNVGITFETRPDWAREEHV DEFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANRVLRDSAFKVGFHMMPHLPGADSELDLRGFKKLFDDQRFRP DYLKIYPTLVTEGTPLYRMWKSGEYQALSDEEAAELVADIKAVLPKWVRLQRIQRDIPAHQIFAGVRKSNLRQLAEEKLR EKGGKCRCIRCREVGHNSLKGRRINEKDIELTVESYEACNGKEHFIAFEDLSADVLIGFTRLRFPAEPHREELQGSALIR ELHVYGSMVPVGKGAKQKEWQHRGYGKELIEHAEKTASESGYGKLSIISGIGAREYYRKLGYDLDGVYMSKPLKD >Mature_554_residues TLKTEFEMKEADYNRACRNILEKVLAGEIKDEDQLNKVKKDVSKLYHLASLPRNGDIIMQGTPEEQALIKEFLRRKPVRT ISGVAVIAVMTSPAPCPHGVCLPCPGGPNSSFKSPQSYMGREPAAMRAIQHEFDPYSQVQSRLSQLKEIGHDVEKVELIV MGGTFSARSLDYQEWFTKRCLEAMNDFTGMEWRDKAWTIGKSLPYVPLEEVQKANETADIRNVGITFETRPDWAREEHVD EFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANRVLRDSAFKVGFHMMPHLPGADSELDLRGFKKLFDDQRFRPD YLKIYPTLVTEGTPLYRMWKSGEYQALSDEEAAELVADIKAVLPKWVRLQRIQRDIPAHQIFAGVRKSNLRQLAEEKLRE KGGKCRCIRCREVGHNSLKGRRINEKDIELTVESYEACNGKEHFIAFEDLSADVLIGFTRLRFPAEPHREELQGSALIRE LHVYGSMVPVGKGAKQKEWQHRGYGKELIEHAEKTASESGYGKLSIISGIGAREYYRKLGYDLDGVYMSKPLKD
Specific function: Unknown
COG id: COG1243
COG function: function code KB; Histone acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI23510283, Length=533, Percent_Identity=43.9024390243902, Blast_Score=416, Evalue=1e-116, Organism=Caenorhabditis elegans, GI133955098, Length=534, Percent_Identity=43.4456928838951, Blast_Score=410, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6325171, Length=564, Percent_Identity=40.6028368794326, Blast_Score=413, Evalue=1e-116, Organism=Drosophila melanogaster, GI19920684, Length=544, Percent_Identity=41.7279411764706, Blast_Score=408, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006638 - InterPro: IPR005910 - InterPro: IPR007197 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 63211; Mature: 63080
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKTEFEMKEADYNRACRNILEKVLAGEIKDEDQLNKVKKDVSKLYHLASLPRNGDIIM CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE QGTPEEQALIKEFLRRKPVRTISGVAVIAVMTSPAPCPHGVCLPCPGGPNSSFKSPQSYM ECCCHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHH GREPAAMRAIQHEFDPYSQVQSRLSQLKEIGHDVEKVELIVMGGTFSARSLDYQEWFTKR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCHHHHHHHH CLEAMNDFTGMEWRDKAWTIGKSLPYVPLEEVQKANETADIRNVGITFETRPDWAREEHV HHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHH DEFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANRVLRDSAFKVGFHMMPHLPGA HHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DSELDLRGFKKLFDDQRFRPDYLKIYPTLVTEGTPLYRMWKSGEYQALSDEEAAELVADI CCCCCHHHHHHHHCCCCCCCCHHEEEHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHH KAVLPKWVRLQRIQRDIPAHQIFAGVRKSNLRQLAEEKLREKGGKCRCIRCREVGHNSLK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCC GRRINEKDIELTVESYEACNGKEHFIAFEDLSADVLIGFTRLRFPAEPHREELQGSALIR CCCCCCCHHEEEEHHHHCCCCCCEEEEEECCCCCHHEEHHHHCCCCCCCHHHHHHHHHHH ELHVYGSMVPVGKGAKQKEWQHRGYGKELIEHAEKTASESGYGKLSIISGIGAREYYRKL HHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH GYDLDGVYMSKPLKD CCCCCCCCCCCCCCC >Mature Secondary Structure TLKTEFEMKEADYNRACRNILEKVLAGEIKDEDQLNKVKKDVSKLYHLASLPRNGDIIM CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE QGTPEEQALIKEFLRRKPVRTISGVAVIAVMTSPAPCPHGVCLPCPGGPNSSFKSPQSYM ECCCHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHH GREPAAMRAIQHEFDPYSQVQSRLSQLKEIGHDVEKVELIVMGGTFSARSLDYQEWFTKR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCHHHHHHHH CLEAMNDFTGMEWRDKAWTIGKSLPYVPLEEVQKANETADIRNVGITFETRPDWAREEHV HHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHH DEFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANRVLRDSAFKVGFHMMPHLPGA HHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DSELDLRGFKKLFDDQRFRPDYLKIYPTLVTEGTPLYRMWKSGEYQALSDEEAAELVADI CCCCCHHHHHHHHCCCCCCCCHHEEEHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHH KAVLPKWVRLQRIQRDIPAHQIFAGVRKSNLRQLAEEKLREKGGKCRCIRCREVGHNSLK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCC GRRINEKDIELTVESYEACNGKEHFIAFEDLSADVLIGFTRLRFPAEPHREELQGSALIR CCCCCCCHHEEEEHHHHCCCCCCEEEEEECCCCCHHEEHHHHCCCCCCCHHHHHHHHHHH ELHVYGSMVPVGKGAKQKEWQHRGYGKELIEHAEKTASESGYGKLSIISGIGAREYYRKL HHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH GYDLDGVYMSKPLKD CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]