| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228066
Identifier: 21228066
GI number: 21228066
Start: 2333939
End: 2334670
Strand: Reverse
Name: 21228066
Synonym: MM_1964
Alternate gene names: NA
Gene position: 2334670-2333939 (Counterclockwise)
Preceding gene: 21228067
Following gene: 21228065
Centisome position: 56.99
GC content: 40.57
Gene sequence:
>732_bases ATGAAAAACCGGGAAATCTATGCTGAAATGCGCTGTATCCCGCCAGTGGTCTTGCGCGCTGACGGCAGGAATTTCAAAAA TACACTTTCAGGCCTGGGCTTTGAAAAACCATATGATACAACCTTCGCCAGAGCAATGGCGGACACTGCTGAACTTTTCA TTAAAAAAAGCGGTTTAAGCCCTTATTTTGCCTATACTTTTTCAGATGAAATCAGTTTTCTGTTTACAGACCTTCCTTTT GACGGCAGGGTTGAGAAAATAGACTCTGTTGTGGCAAGTTTTCTTGGCAGCGCTCTAACAATAAAACTGCGGCTTGAAGC ACCCATAGCTTTTGATTCCAGGCTGGTAGCTCTTCAAAAAGAGGAAGTTTCTGAATACTTTCACTGGAGGCAACTGGAAG CCTGGAGAAACTTTGTAGCGTCCTGGGGATATTATTCCCTCAGAAACGAAGGCATGGGAAAGGATGAAGCCGGAAAATTC CTGAAAGGAAAAAAAGAATGGGAAATCCATGAGATGCTTTTTGAGAGAGGAATAAATCTTGCAGCACTTCCTGCATGGCA GAGGAGAGGGATTATAATCTCTAAAGAAGAATGTGAAATTTCAGGCTTTAATCCTGTTTATGGTAAAGAAGTAAAATCTA TGCGAAGAAGAATAACCCAGAATTGGGAAATTCCAAAATTCAAATCCGAAGAAGGAATTACCTTTTTAGAGAAACTTATT AATAGAAACTAA
Upstream 100 bases:
>100_bases ACCGGTGGGTTATAACCGCAGCGGATATTATTATAGTTAGAGACGTTATCCAGAGATACAAAAAGAGAAAAGAAGACTGA ATTGTCTTTAGAAAAGGTAT
Downstream 100 bases:
>100_bases GTTTTTCAGAGTAAGAAAAGAAAAGGAATGTAGATGCAATGGACAGACTTGAGCTTATAAAAAGGAATGTTCAGGAAATT GTAACAGAAGAAGAACTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: TRNA(His)-5-Guanylyltransferase; TRNAHis Guanylyltransferase Superfamily; TRNA(His) Guanylyltransferase ThgL; TRNA(His) Guanylyltransferase
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKNREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDTTFARAMADTAELFIKKSGLSPYFAYTFSDEISFLFTDLPF DGRVEKIDSVVASFLGSALTIKLRLEAPIAFDSRLVALQKEEVSEYFHWRQLEAWRNFVASWGYYSLRNEGMGKDEAGKF LKGKKEWEIHEMLFERGINLAALPAWQRRGIIISKEECEISGFNPVYGKEVKSMRRRITQNWEIPKFKSEEGITFLEKLI NRN
Sequences:
>Translated_243_residues MKNREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDTTFARAMADTAELFIKKSGLSPYFAYTFSDEISFLFTDLPF DGRVEKIDSVVASFLGSALTIKLRLEAPIAFDSRLVALQKEEVSEYFHWRQLEAWRNFVASWGYYSLRNEGMGKDEAGKF LKGKKEWEIHEMLFERGINLAALPAWQRRGIIISKEECEISGFNPVYGKEVKSMRRRITQNWEIPKFKSEEGITFLEKLI NRN >Mature_243_residues MKNREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDTTFARAMADTAELFIKKSGLSPYFAYTFSDEISFLFTDLPF DGRVEKIDSVVASFLGSALTIKLRLEAPIAFDSRLVALQKEEVSEYFHWRQLEAWRNFVASWGYYSLRNEGMGKDEAGKF LKGKKEWEIHEMLFERGINLAALPAWQRRGIIISKEECEISGFNPVYGKEVKSMRRRITQNWEIPKFKSEEGITFLEKLI NRN
Specific function: Unknown
COG id: COG4021
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI19921364, Length=189, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28183; Mature: 28183
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDTTFARAMADTAELFIKKSGLS CCCCHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PYFAYTFSDEISFLFTDLPFDGRVEKIDSVVASFLGSALTIKLRLEAPIAFDSRLVALQK CEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHH EEVSEYFHWRQLEAWRNFVASWGYYSLRNEGMGKDEAGKFLKGKKEWEIHEMLFERGINL HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCE AALPAWQRRGIIISKEECEISGFNPVYGKEVKSMRRRITQNWEIPKFKSEEGITFLEKLI EECCCHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH NRN CCC >Mature Secondary Structure MKNREIYAEMRCIPPVVLRADGRNFKNTLSGLGFEKPYDTTFARAMADTAELFIKKSGLS CCCCHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PYFAYTFSDEISFLFTDLPFDGRVEKIDSVVASFLGSALTIKLRLEAPIAFDSRLVALQK CEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHH EEVSEYFHWRQLEAWRNFVASWGYYSLRNEGMGKDEAGKFLKGKKEWEIHEMLFERGINL HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCE AALPAWQRRGIIISKEECEISGFNPVYGKEVKSMRRRITQNWEIPKFKSEEGITFLEKLI EECCCHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH NRN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA