Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is czcD

Identifier: 21228054

GI number: 21228054

Start: 2322995

End: 2323516

Strand: Direct

Name: czcD

Synonym: MM_1952

Alternate gene names: NA

Gene position: 2322995-2323516 (Clockwise)

Preceding gene: 21228052

Following gene: 21228055

Centisome position: 56.71

GC content: 44.64

Gene sequence:

>522_bases
ATGCCCGGAAAGAATTCCACAAGTAATCTGCATAATGAAAAAAACGCTCCTGAAGAGTCCCGTAAACAAAATCATAAGCA
TAAAGAGCTTTTTAATTCCCATTTCTCCTCTCATTTTCTCTCTCATATATTTTCCCACACTTATTCTCATATACATTCTT
ACGAGCATTCGCATTTTCATGAGCATTCCCATGGGCACAGCCATACACATGGTAGAGTCGACCCTTCCATAACCACTACG
AGCAAGGGGCTCTGGGCTGTCAAATGGTCTTTCATAGGACTTATGATTACAGCCGTTCTGCAGATTTTCATTGTGTATAT
TTCGGGCAGTGTTGCCCTTCTTGCCGATACCATCCATAACTTCGGGGACGCATCAACAGCGATCCCCCTGGCAATCGCCT
TTTCCCTGGCAAGAAAAAAGCCGAGCAAACGCTTCTCTTATGGTTATGGCAGAGCAGAAGACCTTGCAGGTGTGATCATT
GTTATCCTCATCCTTTTCAGTGCCAGCAGTTGCGGGCTATGA

Upstream 100 bases:

>100_bases
TGACCGGATGCATAATAAATTCTTTTTTAAAGATAAATATCTATATATAAAGCAATAGCCAAGTTTAATATTGAGAACTG
AATCAAAATGAGGGTGACAA

Downstream 100 bases:

>100_bases
ATCCCTGACACGCTTCTTAAACCCTCAGCCCGTAGATCATTTGCAGGCTGTAGCCCTTGCAGCAATCATAGGCTGTATCG
GAAACGAAATTGTTGCAGAG

Product: cobalt-zinc-cadmium resistance protein

Products: NA

Alternate protein names: Cation Diffusion Facilitator Family Transporter; Cation Efflux Family Protein; CDF Family Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Efflux Permease; Co/Zn/Cd Cation Efflux System Protein; Conserved Membrane Protein; Transmembrane Efflux Protein

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFHEHSHGHSHTHGRVDPSITTT
SKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHNFGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVII
VILILFSASSCGL

Sequences:

>Translated_173_residues
MPGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFHEHSHGHSHTHGRVDPSITTT
SKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHNFGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVII
VILILFSASSCGL
>Mature_172_residues
PGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFHEHSHGHSHTHGRVDPSITTTS
KGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHNFGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVIIV
ILILFSASSCGL

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19241; Mature: 19110

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHSHGHSHTHGRVDPSITTTSKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHN
HCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVIIVILILFSASSCGL
CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHSHGHSHTHGRVDPSITTTSKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHN
HCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVIIVILILFSASSCGL
CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA