| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is czcD
Identifier: 21228054
GI number: 21228054
Start: 2322995
End: 2323516
Strand: Direct
Name: czcD
Synonym: MM_1952
Alternate gene names: NA
Gene position: 2322995-2323516 (Clockwise)
Preceding gene: 21228052
Following gene: 21228055
Centisome position: 56.71
GC content: 44.64
Gene sequence:
>522_bases ATGCCCGGAAAGAATTCCACAAGTAATCTGCATAATGAAAAAAACGCTCCTGAAGAGTCCCGTAAACAAAATCATAAGCA TAAAGAGCTTTTTAATTCCCATTTCTCCTCTCATTTTCTCTCTCATATATTTTCCCACACTTATTCTCATATACATTCTT ACGAGCATTCGCATTTTCATGAGCATTCCCATGGGCACAGCCATACACATGGTAGAGTCGACCCTTCCATAACCACTACG AGCAAGGGGCTCTGGGCTGTCAAATGGTCTTTCATAGGACTTATGATTACAGCCGTTCTGCAGATTTTCATTGTGTATAT TTCGGGCAGTGTTGCCCTTCTTGCCGATACCATCCATAACTTCGGGGACGCATCAACAGCGATCCCCCTGGCAATCGCCT TTTCCCTGGCAAGAAAAAAGCCGAGCAAACGCTTCTCTTATGGTTATGGCAGAGCAGAAGACCTTGCAGGTGTGATCATT GTTATCCTCATCCTTTTCAGTGCCAGCAGTTGCGGGCTATGA
Upstream 100 bases:
>100_bases TGACCGGATGCATAATAAATTCTTTTTTAAAGATAAATATCTATATATAAAGCAATAGCCAAGTTTAATATTGAGAACTG AATCAAAATGAGGGTGACAA
Downstream 100 bases:
>100_bases ATCCCTGACACGCTTCTTAAACCCTCAGCCCGTAGATCATTTGCAGGCTGTAGCCCTTGCAGCAATCATAGGCTGTATCG GAAACGAAATTGTTGCAGAG
Product: cobalt-zinc-cadmium resistance protein
Products: NA
Alternate protein names: Cation Diffusion Facilitator Family Transporter; Cation Efflux Family Protein; CDF Family Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Efflux Permease; Co/Zn/Cd Cation Efflux System Protein; Conserved Membrane Protein; Transmembrane Efflux Protein
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFHEHSHGHSHTHGRVDPSITTT SKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHNFGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVII VILILFSASSCGL
Sequences:
>Translated_173_residues MPGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFHEHSHGHSHTHGRVDPSITTT SKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHNFGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVII VILILFSASSCGL >Mature_172_residues PGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFHEHSHGHSHTHGRVDPSITTTS KGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHNFGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVIIV ILILFSASSCGL
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19241; Mature: 19110
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHSHGHSHTHGRVDPSITTTSKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHN HCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVIIVILILFSASSCGL CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PGKNSTSNLHNEKNAPEESRKQNHKHKELFNSHFSSHFLSHIFSHTYSHIHSYEHSHFH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHSHGHSHTHGRVDPSITTTSKGLWAVKWSFIGLMITAVLQIFIVYISGSVALLADTIHN HCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FGDASTAIPLAIAFSLARKKPSKRFSYGYGRAEDLAGVIIVILILFSASSCGL CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA