| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is katE [H]
Identifier: 21228052
GI number: 21228052
Start: 2319473
End: 2321605
Strand: Direct
Name: katE [H]
Synonym: MM_1950
Alternate gene names: 21228052
Gene position: 2319473-2321605 (Clockwise)
Preceding gene: 21228050
Following gene: 21228054
Centisome position: 56.62
GC content: 45.85
Gene sequence:
>2133_bases ATGGATAAAAAGATGATTAACGAAAAAAGCAAAGAGGAGCAGTTGGAAAAGTTTCATGAAGATCCGGAACGTGAGTTTTT AACTACAAACCAGGGAGTCAGGGTAAATAATACGGACATCTCACTCAAAGCAGGAGAAAGAGGACCCACCCTTCTTGAGG ACTTTCACTTCAGAGAAAAATTAACTCATTTTGACCATGAAAGAATTCCTGAAAGAGTCGTTCACGCCAGAGGCTCAGGT GCACATGGTTTCTTCCAGGTATATGAACCCATGACAGAATATACAAGTGCGAAATTCCTGCAGGACCCTAATAAAAAAAC CCCGGTTTTTGTTCGTTTTTCTACCGTTGTAGGGTTCAGGGGCTCGGCAGATACTGTCAGGGATGTCCGGGGTTTTGCTG TTAAATTCTACACTGAGGACGGAAACTATGACCTTGTCGGCAACAACATGCCTGTTTTTTTCATTCAGGATGCAATAAAG TTTCCCGACCTGGTTCATGCGATCAAGCCTGAGCAGGATAACCAGATTCCCCAGGCTTCTGCAGCGCATGATACTTTCTG GGACTTTGTGTCATGTCACCATGAAAATGCGCATATGATCATGTGGGTTCTTTCAGACCGTGCACTTCCAAGAAGCTACC GGATGATGGAGGGTTTTGGGGTTAACACCTTCCGTTTTGTCAATGCCGAAGGTAAGGGCAGGTTTATAAAATTCCACTGG AAGCCCATGCTTGGAATTCATTCCCTTGTCTGGGACGAAACTCAGAAAATAGCAGGAAAAGACCCTGATTTTAACCGTCG TGATCTCTGGGATGCCATTGAGATGGGAGCCTATCCTGAGTTTGAGTTAGGGGTGCAGATCCTGGAGGAAGAGGATGAAT TCAAATTTGACTTTGATATTCTCGACCCTACAAAGTTATGGCCGGAAGAGGATGTACCAATAAAATGGATAGGGAAAATG ACCCTGGACCGCAACCCTGATAATTTCTTTGCTGAGACCGAGCAGGTTGCGTTTTGCCCTGCGAATGTGGTTCCGGGAAT TGACTTTTCCAATGACCCTCTCCTGCAGGGACGGCTTTTCTCGTATCTTGATACACAACTGATCCGCCTTGGAGGTCCTA ACTTCCAGGAGATTCCAGTTAATCGAGCGCTAGCACCGGTGGCTAACAATCAGAGGGAAGGATATAACCGTATGACAATA AACAAGGGCAAAACGAGTTATTTCCCGAATACTGTAGGAGATGGCAAGCCAAGGCCAGCTTCTGCAGAAGAAGGCGGTTA TGTCCATTATATGGAAAAAGTGGAAGGCAAGATAATCCGTTCCCGCAGCGAAAAGTTCAAAGATTTTTTCAGCCAGGCAA AATTATTCTGGAACAGCATGTCGCAACCTGAAAAAGAACATATTATAGAGGCTTTCCATTTCGAAATAGGAAAGGTCAAG GACAAGAAAATCAGGCAGGCAGTTGTTGATATGTTCAATAACGTCGATGGTGACCTGGCAGTAGAGATTGCAAAGGGGGT CGGTGTCTCTGCTCCGGCACAGAAAGGAGGTTCTCCTGTAGCTAAAGAATCGCCAAATTTGAGCCAGGAACGCAGTGAAC GTAATGTGAAAAATACTATCAAAACCAGGAAAATCGCCATCATTGTCGCGGACGGATATGACCACAAAGACCTGAGCCAG GTAATGCAGGCTCTGGAAGCCGGTGGAGCAAGAGCCGACATTATCTCAAAATTCCAGGGCATGCTGAAGAGCTCGGACGG TCAGGAAATTGAAGTTGACAAAAATTACCGCACTACAGAATCGGTTCTGTATGATGCTGTATACATCCCCGGAGGAAAAG AAAATGTGGAAACCCTGAAAAAGCATGGGGATGCTATCCACTTCGTCAATGAAGCTTTCAGGCACTGCAAGCCTCTGGGT GCAACAGGCGAAGGAGTCGAATTATTTAAAGCTGCCCATCTTCCGGATATAAAACTCGCAGGAAAGAGTTCTGCTGATAA GGTGGTTTCCGATAAAGGGGTGGTGACCGCCAGAAATGAAGGGGACAGAAGCTCTTTTAATGAGTCTTTTACCATCGCAA TTGCACAGCACCGCCACTGGAACAGGGAGAAAAAGGAACAGGTTCCTGCCTGA
Upstream 100 bases:
>100_bases ACCTGAATCGTAGATAGTCCATGCTTATTGAATTCTTGTATAAACTATGGGCTCCAGCACCGAATAATCTGGACTATATA AACTGGGAGGATAACTGTAT
Downstream 100 bases:
>100_bases ACTCTTTAAGGAAGAGTTCTCCGGCTTTATTTTTTAACCGTTTCTCTCTTTTTTCTTCCTCTTTAATTCTATTTTTAATC TTTTTATTTTACTTCCTTTT
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 710; Mature: 710
Protein sequence:
>710_residues MDKKMINEKSKEEQLEKFHEDPEREFLTTNQGVRVNNTDISLKAGERGPTLLEDFHFREKLTHFDHERIPERVVHARGSG AHGFFQVYEPMTEYTSAKFLQDPNKKTPVFVRFSTVVGFRGSADTVRDVRGFAVKFYTEDGNYDLVGNNMPVFFIQDAIK FPDLVHAIKPEQDNQIPQASAAHDTFWDFVSCHHENAHMIMWVLSDRALPRSYRMMEGFGVNTFRFVNAEGKGRFIKFHW KPMLGIHSLVWDETQKIAGKDPDFNRRDLWDAIEMGAYPEFELGVQILEEEDEFKFDFDILDPTKLWPEEDVPIKWIGKM TLDRNPDNFFAETEQVAFCPANVVPGIDFSNDPLLQGRLFSYLDTQLIRLGGPNFQEIPVNRALAPVANNQREGYNRMTI NKGKTSYFPNTVGDGKPRPASAEEGGYVHYMEKVEGKIIRSRSEKFKDFFSQAKLFWNSMSQPEKEHIIEAFHFEIGKVK DKKIRQAVVDMFNNVDGDLAVEIAKGVGVSAPAQKGGSPVAKESPNLSQERSERNVKNTIKTRKIAIIVADGYDHKDLSQ VMQALEAGGARADIISKFQGMLKSSDGQEIEVDKNYRTTESVLYDAVYIPGGKENVETLKKHGDAIHFVNEAFRHCKPLG ATGEGVELFKAAHLPDIKLAGKSSADKVVSDKGVVTARNEGDRSSFNESFTIAIAQHRHWNREKKEQVPA
Sequences:
>Translated_710_residues MDKKMINEKSKEEQLEKFHEDPEREFLTTNQGVRVNNTDISLKAGERGPTLLEDFHFREKLTHFDHERIPERVVHARGSG AHGFFQVYEPMTEYTSAKFLQDPNKKTPVFVRFSTVVGFRGSADTVRDVRGFAVKFYTEDGNYDLVGNNMPVFFIQDAIK FPDLVHAIKPEQDNQIPQASAAHDTFWDFVSCHHENAHMIMWVLSDRALPRSYRMMEGFGVNTFRFVNAEGKGRFIKFHW KPMLGIHSLVWDETQKIAGKDPDFNRRDLWDAIEMGAYPEFELGVQILEEEDEFKFDFDILDPTKLWPEEDVPIKWIGKM TLDRNPDNFFAETEQVAFCPANVVPGIDFSNDPLLQGRLFSYLDTQLIRLGGPNFQEIPVNRALAPVANNQREGYNRMTI NKGKTSYFPNTVGDGKPRPASAEEGGYVHYMEKVEGKIIRSRSEKFKDFFSQAKLFWNSMSQPEKEHIIEAFHFEIGKVK DKKIRQAVVDMFNNVDGDLAVEIAKGVGVSAPAQKGGSPVAKESPNLSQERSERNVKNTIKTRKIAIIVADGYDHKDLSQ VMQALEAGGARADIISKFQGMLKSSDGQEIEVDKNYRTTESVLYDAVYIPGGKENVETLKKHGDAIHFVNEAFRHCKPLG ATGEGVELFKAAHLPDIKLAGKSSADKVVSDKGVVTARNEGDRSSFNESFTIAIAQHRHWNREKKEQVPA >Mature_710_residues MDKKMINEKSKEEQLEKFHEDPEREFLTTNQGVRVNNTDISLKAGERGPTLLEDFHFREKLTHFDHERIPERVVHARGSG AHGFFQVYEPMTEYTSAKFLQDPNKKTPVFVRFSTVVGFRGSADTVRDVRGFAVKFYTEDGNYDLVGNNMPVFFIQDAIK FPDLVHAIKPEQDNQIPQASAAHDTFWDFVSCHHENAHMIMWVLSDRALPRSYRMMEGFGVNTFRFVNAEGKGRFIKFHW KPMLGIHSLVWDETQKIAGKDPDFNRRDLWDAIEMGAYPEFELGVQILEEEDEFKFDFDILDPTKLWPEEDVPIKWIGKM TLDRNPDNFFAETEQVAFCPANVVPGIDFSNDPLLQGRLFSYLDTQLIRLGGPNFQEIPVNRALAPVANNQREGYNRMTI NKGKTSYFPNTVGDGKPRPASAEEGGYVHYMEKVEGKIIRSRSEKFKDFFSQAKLFWNSMSQPEKEHIIEAFHFEIGKVK DKKIRQAVVDMFNNVDGDLAVEIAKGVGVSAPAQKGGSPVAKESPNLSQERSERNVKNTIKTRKIAIIVADGYDHKDLSQ VMQALEAGGARADIISKFQGMLKSSDGQEIEVDKNYRTTESVLYDAVYIPGGKENVETLKKHGDAIHFVNEAFRHCKPLG ATGEGVELFKAAHLPDIKLAGKSSADKVVSDKGVVTARNEGDRSSFNESFTIAIAQHRHWNREKKEQVPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Involved in sporulation [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=484, Percent_Identity=42.1487603305785, Blast_Score=370, Evalue=1e-102, Organism=Escherichia coli, GI48994891, Length=712, Percent_Identity=50.7022471910112, Blast_Score=714, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=503, Percent_Identity=40.7554671968191, Blast_Score=383, Evalue=1e-106, Organism=Caenorhabditis elegans, GI25147792, Length=501, Percent_Identity=40.5189620758483, Blast_Score=370, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25151141, Length=494, Percent_Identity=40.6882591093117, Blast_Score=370, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6320462, Length=491, Percent_Identity=37.6782077393075, Blast_Score=316, Evalue=7e-87, Organism=Saccharomyces cerevisiae, GI6321525, Length=336, Percent_Identity=43.1547619047619, Blast_Score=289, Evalue=1e-78, Organism=Drosophila melanogaster, GI17981717, Length=433, Percent_Identity=43.8799076212471, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI19920968, Length=499, Percent_Identity=38.6773547094188, Blast_Score=352, Evalue=5e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 - InterPro: IPR002818 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel; PF01965 DJ-1_PfpI [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 80579; Mature: 80579
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKMINEKSKEEQLEKFHEDPEREFLTTNQGVRVNNTDISLKAGERGPTLLEDFHFREK CCCHHHCCHHHHHHHHHHHCCCCHHHEECCCCEEECCCEEEEECCCCCCHHHHHHHHHHH LTHFDHERIPERVVHARGSGAHGFFQVYEPMTEYTSAKFLQDPNKKTPVFVRFSTVVGFR HHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECC GSADTVRDVRGFAVKFYTEDGNYDLVGNNMPVFFIQDAIKFPDLVHAIKPEQDNQIPQAS CCCHHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHCCCCCCCCCCCCC AAHDTFWDFVSCHHENAHMIMWVLSDRALPRSYRMMEGFGVNTFRFVNAEGKGRFIKFHW CCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEEEC KPMLGIHSLVWDETQKIAGKDPDFNRRDLWDAIEMGAYPEFELGVQILEEEDEFKFDFDI CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHCHHEECCCCCCEEEEEE LDPTKLWPEEDVPIKWIGKMTLDRNPDNFFAETEQVAFCPANVVPGIDFSNDPLLQGRLF CCCHHCCCCCCCCEEEEEEEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHH SYLDTQLIRLGGPNFQEIPVNRALAPVANNQREGYNRMTINKGKTSYFPNTVGDGKPRPA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC SAEEGGYVHYMEKVEGKIIRSRSEKFKDFFSQAKLFWNSMSQPEKEHIIEAFHFEIGKVK CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DKKIRQAVVDMFNNVDGDLAVEIAKGVGVSAPAQKGGSPVAKESPNLSQERSERNVKNTI HHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHH KTRKIAIIVADGYDHKDLSQVMQALEAGGARADIISKFQGMLKSSDGQEIEVDKNYRTTE CEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHH SVLYDAVYIPGGKENVETLKKHGDAIHFVNEAFRHCKPLGATGEGVELFKAAHLPDIKLA HHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEC GKSSADKVVSDKGVVTARNEGDRSSFNESFTIAIAQHRHWNREKKEQVPA CCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCC >Mature Secondary Structure MDKKMINEKSKEEQLEKFHEDPEREFLTTNQGVRVNNTDISLKAGERGPTLLEDFHFREK CCCHHHCCHHHHHHHHHHHCCCCHHHEECCCCEEECCCEEEEECCCCCCHHHHHHHHHHH LTHFDHERIPERVVHARGSGAHGFFQVYEPMTEYTSAKFLQDPNKKTPVFVRFSTVVGFR HHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECC GSADTVRDVRGFAVKFYTEDGNYDLVGNNMPVFFIQDAIKFPDLVHAIKPEQDNQIPQAS CCCHHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHCCCCCCCCCCCCC AAHDTFWDFVSCHHENAHMIMWVLSDRALPRSYRMMEGFGVNTFRFVNAEGKGRFIKFHW CCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEEEC KPMLGIHSLVWDETQKIAGKDPDFNRRDLWDAIEMGAYPEFELGVQILEEEDEFKFDFDI CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHCHHEECCCCCCEEEEEE LDPTKLWPEEDVPIKWIGKMTLDRNPDNFFAETEQVAFCPANVVPGIDFSNDPLLQGRLF CCCHHCCCCCCCCEEEEEEEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHH SYLDTQLIRLGGPNFQEIPVNRALAPVANNQREGYNRMTINKGKTSYFPNTVGDGKPRPA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC SAEEGGYVHYMEKVEGKIIRSRSEKFKDFFSQAKLFWNSMSQPEKEHIIEAFHFEIGKVK CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DKKIRQAVVDMFNNVDGDLAVEIAKGVGVSAPAQKGGSPVAKESPNLSQERSERNVKNTI HHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHH KTRKIAIIVADGYDHKDLSQVMQALEAGGARADIISKFQGMLKSSDGQEIEVDKNYRTTE CEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHH SVLYDAVYIPGGKENVETLKKHGDAIHFVNEAFRHCKPLGATGEGVELFKAAHLPDIKLA HHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEC GKSSADKVVSDKGVVTARNEGDRSSFNESFTIAIAQHRHWNREKKEQVPA CCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]