| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21228010
Identifier: 21228010
GI number: 21228010
Start: 2266151
End: 2266558
Strand: Direct
Name: 21228010
Synonym: MM_1908
Alternate gene names: NA
Gene position: 2266151-2266558 (Clockwise)
Preceding gene: 21228008
Following gene: 21228011
Centisome position: 55.32
GC content: 47.06
Gene sequence:
>408_bases TTGCTTTTAATCCTCCCGGCTCTTGAATACAGCCTATTTCCCGGGTATTCACCTGCCGTTACAGCCACAGGCACATTTCT GGCAGTATCCGGTACAATCCTCAGGGCATGGGGCATATGGACCCTGGGCAAATACTTTTCCGTGCATATTGAGATTAAGG ACAGGCACGAGCTTATAGAAAGCGGACCTTACAGGTTCATAAGACATCCTGCTTACGCAGGGAATCTCCTGCAGGCCGTC GGTATTCCTCTTATCCTCAATGCGTATTATTCACTCAGCATTTCGGCAGTACTTGTTTTTCTCTTCCTGTACAGGCTGAA GCTGGAAGAAGAGACCTTGCTCCGGGAAGTGAACGGGTATAAAGATTATGTAAAGAGAACTTACAGGCTGGTCCCAAAAA TATGGTAA
Upstream 100 bases:
>100_bases ATTTTCTCTGAAGGCAGAAAAATTCGCATACAGGGGTTCTGACCTTCCAGGAATACAGTCAGATAAATGGACTCGTTACC TGCTTTTATTCTTCTGGTGG
Downstream 100 bases:
>100_bases TTCTAGATCAGGTTACTGAGGATGAAGTTCCTGAATCTTTTACCTTATTTCCAGAAAGATAAGCTCTGGAAAAAAATGAA AATTAATTAAGATACTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-S Isoprenylcysteine O-Methyltransferase
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLLILPALEYSLFPGYSPAVTATGTFLAVSGTILRAWGIWTLGKYFSVHIEIKDRHELIESGPYRFIRHPAYAGNLLQAV GIPLILNAYYSLSISAVLVFLFLYRLKLEEETLLREVNGYKDYVKRTYRLVPKIW
Sequences:
>Translated_135_residues MLLILPALEYSLFPGYSPAVTATGTFLAVSGTILRAWGIWTLGKYFSVHIEIKDRHELIESGPYRFIRHPAYAGNLLQAV GIPLILNAYYSLSISAVLVFLFLYRLKLEEETLLREVNGYKDYVKRTYRLVPKIW >Mature_135_residues MLLILPALEYSLFPGYSPAVTATGTFLAVSGTILRAWGIWTLGKYFSVHIEIKDRHELIESGPYRFIRHPAYAGNLLQAV GIPLILNAYYSLSISAVLVFLFLYRLKLEEETLLREVNGYKDYVKRTYRLVPKIW
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15484; Mature: 15484
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLILPALEYSLFPGYSPAVTATGTFLAVSGTILRAWGIWTLGKYFSVHIEIKDRHELIE CEEEEECCHHHCCCCCCCCEECCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCHHHHHH SGPYRFIRHPAYAGNLLQAVGIPLILNAYYSLSISAVLVFLFLYRLKLEEETLLREVNGY CCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH KDYVKRTYRLVPKIW HHHHHHHHHHCCCCC >Mature Secondary Structure MLLILPALEYSLFPGYSPAVTATGTFLAVSGTILRAWGIWTLGKYFSVHIEIKDRHELIE CEEEEECCHHHCCCCCCCCEECCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCHHHHHH SGPYRFIRHPAYAGNLLQAVGIPLILNAYYSLSISAVLVFLFLYRLKLEEETLLREVNGY CCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCH KDYVKRTYRLVPKIW HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA