| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228002
Identifier: 21228002
GI number: 21228002
Start: 2259752
End: 2260303
Strand: Reverse
Name: 21228002
Synonym: MM_1900
Alternate gene names: NA
Gene position: 2260303-2259752 (Counterclockwise)
Preceding gene: 21228004
Following gene: 21228001
Centisome position: 55.18
GC content: 41.12
Gene sequence:
>552_bases GTGATAATAGTCCTTTTCATAACATACCTTATTCTGCAGAAACCCGGGGAACCCCTTAGGATGATAGCCCGATTTGCAGC AACATTCGGATACCTGGCAATTTTCCTTTCAATACTCAGCTCCGAATACATGGCTAAAATGAGAAAAATATCAGGAATGC CTTTTTTAAGAGCCCACCATAATCTGGCAAGAATTGGAGTCCTGTTAATCCTGATTCATCCTTTAAGCCTTGCCCTTCAA GCTCAGGACTTCACGATTTTCCTGCCAGTATTGTATCCTGTAGAGACTTTTCTCGCACTGGGCGGCAGGACTGCACTCTA TCTATTCCTCCTGGCTGCAGGCATTGCCCTTTACAGGAAGAAATACAGAAACTGGAAGAAGGTGCATTACCTGAATTACC TGGCTTTTTTGCTTGTTTCAGCTCACGCTTTAATGATAGGGAGCGATTTTAAACAGGACATAATGAGAATCATTGCAATT ATAATGGCAGTTACTGTAACAGGTATATTCATACATAAGAGAATCGGTGTCGGAAAAAAGATATATAAGTAA
Upstream 100 bases:
>100_bases CAGGGGAGATACTGGAAAAGAAATCGGCAATAAACAAGGCAAAGAAACTCCAGGCAACAGAAAAAAAGATCAGCAATTTT ACTTAATTTATGGCATTATT
Downstream 100 bases:
>100_bases AAATATATTTCTGTTCATGGTTGAATTTTCAGTGATAGTGGGCTCAACAGGCGTACTCATGTTACTGCTGGCCTTTCTCC TTAATCTCTTCAAGATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MIIVLFITYLILQKPGEPLRMIARFAATFGYLAIFLSILSSEYMAKMRKISGMPFLRAHHNLARIGVLLILIHPLSLALQ AQDFTIFLPVLYPVETFLALGGRTALYLFLLAAGIALYRKKYRNWKKVHYLNYLAFLLVSAHALMIGSDFKQDIMRIIAI IMAVTVTGIFIHKRIGVGKKIYK
Sequences:
>Translated_183_residues MIIVLFITYLILQKPGEPLRMIARFAATFGYLAIFLSILSSEYMAKMRKISGMPFLRAHHNLARIGVLLILIHPLSLALQ AQDFTIFLPVLYPVETFLALGGRTALYLFLLAAGIALYRKKYRNWKKVHYLNYLAFLLVSAHALMIGSDFKQDIMRIIAI IMAVTVTGIFIHKRIGVGKKIYK >Mature_183_residues MIIVLFITYLILQKPGEPLRMIARFAATFGYLAIFLSILSSEYMAKMRKISGMPFLRAHHNLARIGVLLILIHPLSLALQ AQDFTIFLPVLYPVETFLALGGRTALYLFLLAAGIALYRKKYRNWKKVHYLNYLAFLLVSAHALMIGSDFKQDIMRIIAI IMAVTVTGIFIHKRIGVGKKIYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20817; Mature: 20817
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVLFITYLILQKPGEPLRMIARFAATFGYLAIFLSILSSEYMAKMRKISGMPFLRAHH CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NLARIGVLLILIHPLSLALQAQDFTIFLPVLYPVETFLALGGRTALYLFLLAAGIALYRK HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KYRNWKKVHYLNYLAFLLVSAHALMIGSDFKQDIMRIIAIIMAVTVTGIFIHKRIGVGKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IYK CCC >Mature Secondary Structure MIIVLFITYLILQKPGEPLRMIARFAATFGYLAIFLSILSSEYMAKMRKISGMPFLRAHH CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NLARIGVLLILIHPLSLALQAQDFTIFLPVLYPVETFLALGGRTALYLFLLAAGIALYRK HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KYRNWKKVHYLNYLAFLLVSAHALMIGSDFKQDIMRIIAIIMAVTVTGIFIHKRIGVGKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IYK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA