| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227984
Identifier: 21227984
GI number: 21227984
Start: 2236384
End: 2236722
Strand: Reverse
Name: 21227984
Synonym: MM_1882
Alternate gene names: NA
Gene position: 2236722-2236384 (Counterclockwise)
Preceding gene: 21227986
Following gene: 21227975
Centisome position: 54.6
GC content: 40.12
Gene sequence:
>339_bases ATGGATTCAGATGAAAGTGAAAGAATAAAAAAAGAATGGCTCGAGAGGATGAAACGTGAAGGAAAGCTGACGCGAAACCC CACGGAAGACCATAAGTTCGGACTCAAGGTTCTTCAGAACACCACAAGAAGAGAGATCCTTATTTCGCTTGGAAGTGAGA GAAAATCCTTTGAGGAAATAAAAGAAAAATTTAACCTGAACGACTCCATGGCAAATTTCCACCTTAATATGCTGGAAGAT GCACTTTATATCGAAAAAGTGGAAGAAGAAGGCAAGACATTCTATATCCCAACCCCTCGCGGAGAAGGTTATGTTGAGAA TGTGGAAATGAAGAAGTAA
Upstream 100 bases:
>100_bases AGATAACGATATTTATTTATAGTAGTAGTCTAAAAAATAGAGAGATAGATATCGTAATACAAACTTGTTCCAGAAAATGC TCTTGAAAAGGTGACCGAAA
Downstream 100 bases:
>100_bases GATGACCGGTGATGCAGTAAAAAGCAGCCTGAGCCAAAAAATATAGAAGCCCCGGAATTTAAAATTCAACTGAGAAATAA CCGGGAATCAAAAAATAATT
Product: hypothetical protein
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MDSDESERIKKEWLERMKREGKLTRNPTEDHKFGLKVLQNTTRREILISLGSERKSFEEIKEKFNLNDSMANFHLNMLED ALYIEKVEEEGKTFYIPTPRGEGYVENVEMKK
Sequences:
>Translated_112_residues MDSDESERIKKEWLERMKREGKLTRNPTEDHKFGLKVLQNTTRREILISLGSERKSFEEIKEKFNLNDSMANFHLNMLED ALYIEKVEEEGKTFYIPTPRGEGYVENVEMKK >Mature_112_residues MDSDESERIKKEWLERMKREGKLTRNPTEDHKFGLKVLQNTTRREILISLGSERKSFEEIKEKFNLNDSMANFHLNMLED ALYIEKVEEEGKTFYIPTPRGEGYVENVEMKK
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13343; Mature: 13343
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSDESERIKKEWLERMKREGKLTRNPTEDHKFGLKVLQNTTRREILISLGSERKSFEEI CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH KEKFNLNDSMANFHLNMLEDALYIEKVEEEGKTFYIPTPRGEGYVENVEMKK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MDSDESERIKKEWLERMKREGKLTRNPTEDHKFGLKVLQNTTRREILISLGSERKSFEEI CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH KEKFNLNDSMANFHLNMLEDALYIEKVEEEGKTFYIPTPRGEGYVENVEMKK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA