Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227969

Identifier: 21227969

GI number: 21227969

Start: 2218665

End: 2218868

Strand: Reverse

Name: 21227969

Synonym: MM_1867

Alternate gene names: NA

Gene position: 2218868-2218665 (Counterclockwise)

Preceding gene: 21227970

Following gene: 21227968

Centisome position: 54.17

GC content: 30.39

Gene sequence:

>204_bases
TTGATCAAGGGGAAGCTTTTAAAAGAACTGCGAAAGTTAAACAAGAAGAATCATGTACTTTTCGAGGCAGTCTTCAAAAA
AGCTGATGAAATGTGTATCAATCCTCAACATTACAAAAATCTCAATTATCCCTTAAATAAATATAAACGAGTACATATTG
ATTCTAACTTTGTACTATGTTTTTCTGTTGACGAAAAAGAGTAA

Upstream 100 bases:

>100_bases
CGGAGAGTGATGAAGTAATTGGACCATTCAAAAATGCCGATGAACTAAAAGCATACATCAAAAGCTTGCCTGATGAGGAT
GAGTAAGCTTGTACAAATTA

Downstream 100 bases:

>100_bases
ACTGTGACATTGGTGAAATTAGCCCATCACAAAGATGCTTATTGATTAAAGTTTAAAAATTGGGTAATAGACTTGAGGAG
TTATTGAAAGCCACAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLCFSVDEKE

Sequences:

>Translated_67_residues
MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLCFSVDEKE
>Mature_67_residues
MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLCFSVDEKE

Specific function: Unknown

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1173 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8053; Mature: 8053

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLC
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCEEEE
FSVDEKE
EECCCCC
>Mature Secondary Structure
MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLC
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCEEEE
FSVDEKE
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]