Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227962

Identifier: 21227962

GI number: 21227962

Start: 2211994

End: 2212935

Strand: Reverse

Name: 21227962

Synonym: MM_1860

Alternate gene names: NA

Gene position: 2212935-2211994 (Counterclockwise)

Preceding gene: 21227964

Following gene: 21227961

Centisome position: 54.02

GC content: 43.84

Gene sequence:

>942_bases
ATGGAAAAAGGCTGGAAACGGGCAGACCTGCATGTGCATACTACCTGTTCTTTCGACGTGCTTCCGGCAAAAGATTTGAA
TCCCCTGAGTCTTTACGAAAAGTCTCTTGAGATTGGGATGGATTTTGTAACATTTACAGACCATGATACTGTAGAGGCAT
ACGAAATCCTGGGCTGGGACCGCGAAAAGCTCACTCCGGGGGCTGAGATGACCTTATATGACCCGGAATTTGCAGGGCAT
ACTTTGCACATCAACGTTTTCGAGCTTGACAGAGAGTATTTTTCAGAACTCAGGGAAATAGCAGAAATAGAGCATGACCT
CAAAAGTTTTACAGGATACCTCAAACGGCACAGGCTTCCTTTTGTTTACAACCACCCTTTCTGGTTTGAGTTCCACAGGC
AACCGAACCCTTCCGCAGTGCCGAAGCTGGCAAAGCTCTTTCCTGTGCTTGAATACAATATGCACGAGCTCAAGCAGAAA
AATGAACTTACAATAGCTCTTGCAGAAAGGTTTGGCAAAAGCATTGTTGCGACAACGGATACCCATACCGGAAAAATGGG
CCAGGTATATACCCTGGCAAAAGGGGATAGTTTCAGGGAATATTTCAGGAACATAGAGAAAGGGAGAAATTACATAGTTA
CCGGAGACCTTACAAGAGAACTGCTGATAGAAGAAATGAACACCTGGATAGACCTGATCTTTGAAAAAAGCCAGAAGAAC
CGGGACATAAAAAACTACCTGACAGGAATAAAGTCCCTGGATGCACTGGTAAAAATCTCGAGGAGCACTCTTTTAAACTA
CTCTCCGAGGCTTAACAGGACAGCTATGAACCTTTTTTATATGATCTCAAACACAGGGCTTCCGGCTTCATTCTACATCC
ATTCGGAAAAAAGCTTTGCCAGAGAGATCGAAAAAGACATTGAGATCAATAACAGGAAGTAA

Upstream 100 bases:

>100_bases
AATCAAAAAAAATTAAAAACCTCATAATTCTACGCCGATAGGGGGAAGGCAGAGGAATTGCGAAGAAAAGCTGATAACAC
CGGAAAGGGCAGCTGAGCTT

Downstream 100 bases:

>100_bases
AGTTACATGTCTTATTTTCCGTTTTTCTTATCCCAGCGATTTTAACCAGTATTTTTAATAATTCAGCATCACTTTCCCAA
TTAGTTGTAATTTTGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MEKGWKRADLHVHTTCSFDVLPAKDLNPLSLYEKSLEIGMDFVTFTDHDTVEAYEILGWDREKLTPGAEMTLYDPEFAGH
TLHINVFELDREYFSELREIAEIEHDLKSFTGYLKRHRLPFVYNHPFWFEFHRQPNPSAVPKLAKLFPVLEYNMHELKQK
NELTIALAERFGKSIVATTDTHTGKMGQVYTLAKGDSFREYFRNIEKGRNYIVTGDLTRELLIEEMNTWIDLIFEKSQKN
RDIKNYLTGIKSLDALVKISRSTLLNYSPRLNRTAMNLFYMISNTGLPASFYIHSEKSFAREIEKDIEINNRK

Sequences:

>Translated_313_residues
MEKGWKRADLHVHTTCSFDVLPAKDLNPLSLYEKSLEIGMDFVTFTDHDTVEAYEILGWDREKLTPGAEMTLYDPEFAGH
TLHINVFELDREYFSELREIAEIEHDLKSFTGYLKRHRLPFVYNHPFWFEFHRQPNPSAVPKLAKLFPVLEYNMHELKQK
NELTIALAERFGKSIVATTDTHTGKMGQVYTLAKGDSFREYFRNIEKGRNYIVTGDLTRELLIEEMNTWIDLIFEKSQKN
RDIKNYLTGIKSLDALVKISRSTLLNYSPRLNRTAMNLFYMISNTGLPASFYIHSEKSFAREIEKDIEINNRK
>Mature_313_residues
MEKGWKRADLHVHTTCSFDVLPAKDLNPLSLYEKSLEIGMDFVTFTDHDTVEAYEILGWDREKLTPGAEMTLYDPEFAGH
TLHINVFELDREYFSELREIAEIEHDLKSFTGYLKRHRLPFVYNHPFWFEFHRQPNPSAVPKLAKLFPVLEYNMHELKQK
NELTIALAERFGKSIVATTDTHTGKMGQVYTLAKGDSFREYFRNIEKGRNYIVTGDLTRELLIEEMNTWIDLIFEKSQKN
RDIKNYLTGIKSLDALVKISRSTLLNYSPRLNRTAMNLFYMISNTGLPASFYIHSEKSFAREIEKDIEINNRK

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36661; Mature: 36661

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKGWKRADLHVHTTCSFDVLPAKDLNPLSLYEKSLEIGMDFVTFTDHDTVEAYEILGWD
CCCCCEECCEEEEEEECEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCC
REKLTPGAEMTLYDPEFAGHTLHINVFELDREYFSELREIAEIEHDLKSFTGYLKRHRLP
HHHCCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVYNHPFWFEFHRQPNPSAVPKLAKLFPVLEYNMHELKQKNELTIALAERFGKSIVATTD
EEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEHHHHCCEEEEECC
THTGKMGQVYTLAKGDSFREYFRNIEKGRNYIVTGDLTRELLIEEMNTWIDLIFEKSQKN
CCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
RDIKNYLTGIKSLDALVKISRSTLLNYSPRLNRTAMNLFYMISNTGLPASFYIHSEKSFA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCEEEEEECCHHHH
REIEKDIEINNRK
HHHHHHCCCCCCC
>Mature Secondary Structure
MEKGWKRADLHVHTTCSFDVLPAKDLNPLSLYEKSLEIGMDFVTFTDHDTVEAYEILGWD
CCCCCEECCEEEEEEECEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCC
REKLTPGAEMTLYDPEFAGHTLHINVFELDREYFSELREIAEIEHDLKSFTGYLKRHRLP
HHHCCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVYNHPFWFEFHRQPNPSAVPKLAKLFPVLEYNMHELKQKNELTIALAERFGKSIVATTD
EEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEHHHHCCEEEEECC
THTGKMGQVYTLAKGDSFREYFRNIEKGRNYIVTGDLTRELLIEEMNTWIDLIFEKSQKN
CCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
RDIKNYLTGIKSLDALVKISRSTLLNYSPRLNRTAMNLFYMISNTGLPASFYIHSEKSFA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCEEEEEECCHHHH
REIEKDIEINNRK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA