Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227950

Identifier: 21227950

GI number: 21227950

Start: 2199560

End: 2199928

Strand: Direct

Name: 21227950

Synonym: MM_1848

Alternate gene names: NA

Gene position: 2199560-2199928 (Clockwise)

Preceding gene: 21227949

Following gene: 21227951

Centisome position: 53.7

GC content: 37.94

Gene sequence:

>369_bases
TTGCAGATGATTATAGATTATGATACTGGAGATCAAATTCATGTAGTGGGTGACAGCATATCTCCAGAATTTACCCTGTT
TCAGGGGGGTCAGCATGACTATCTGGTTCAGTATTCTCCATATCCTCTGACTTTGCTAATTTCAGGACCTTCTCTTCACA
CACCATCATGTAACCGAGGGAAAACCGGTACTCTCTTTTATAAAAAAGTAAGCTTTCAGGGATGGAAGTTTCTTCTGAAG
AAAAGTTTTATCAGGTTTTTTCCTGATTTTTTCTTTTCCCTTATCTTTTTATTTTTCCACGCCAATCTACTTTGTGAGGT
ATATCGTCCGTTTGATGCTGTCTATGAATGGCATGCTTCTCATCTTTAA

Upstream 100 bases:

>100_bases
GAAATAGACGAATTTCCGAAATTGCGGGCCCTCTGGCGTATCCTCTGCAGTATTATATGTTTACATTAAGTAAGAATCCT
CTTAAAATTTTGAATATTCT

Downstream 100 bases:

>100_bases
GCACAGGTGTTCTGGATATGTATGATCTCATTATAGTAGGTGGAGGGCCTTCGGGAGCTTCTGCTGGAAGAGTAGCCGGA
AAAGCAGGAATTTCAACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MQMIIDYDTGDQIHVVGDSISPEFTLFQGGQHDYLVQYSPYPLTLLISGPSLHTPSCNRGKTGTLFYKKVSFQGWKFLLK
KSFIRFFPDFFFSLIFLFFHANLLCEVYRPFDAVYEWHASHL

Sequences:

>Translated_122_residues
MQMIIDYDTGDQIHVVGDSISPEFTLFQGGQHDYLVQYSPYPLTLLISGPSLHTPSCNRGKTGTLFYKKVSFQGWKFLLK
KSFIRFFPDFFFSLIFLFFHANLLCEVYRPFDAVYEWHASHL
>Mature_122_residues
MQMIIDYDTGDQIHVVGDSISPEFTLFQGGQHDYLVQYSPYPLTLLISGPSLHTPSCNRGKTGTLFYKKVSFQGWKFLLK
KSFIRFFPDFFFSLIFLFFHANLLCEVYRPFDAVYEWHASHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14258; Mature: 14258

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMIIDYDTGDQIHVVGDSISPEFTLFQGGQHDYLVQYSPYPLTLLISGPSLHTPSCNRG
CCEEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCC
KTGTLFYKKVSFQGWKFLLKKSFIRFFPDFFFSLIFLFFHANLLCEVYRPFDAVYEWHAS
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
HL
CC
>Mature Secondary Structure
MQMIIDYDTGDQIHVVGDSISPEFTLFQGGQHDYLVQYSPYPLTLLISGPSLHTPSCNRG
CCEEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCC
KTGTLFYKKVSFQGWKFLLKKSFIRFFPDFFFSLIFLFFHANLLCEVYRPFDAVYEWHAS
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
HL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA