Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21227949

Identifier: 21227949

GI number: 21227949

Start: 2198571

End: 2199569

Strand: Direct

Name: 21227949

Synonym: MM_1847

Alternate gene names: NA

Gene position: 2198571-2199569 (Clockwise)

Preceding gene: 21227948

Following gene: 21227950

Centisome position: 53.67

GC content: 39.24

Gene sequence:

>999_bases
ATGGACAAAGAAATTAATATTTTAGGAGGAGGAATAAGCGGCCTCGCCTGTGCAATAATCCTCCGTAATAATGGCTATAA
AGTTAATATTTATGAAAAGGGCAGTTATGTTGGTAAAAGATTCAACGACGATTGGCAGGGGTTAGAAAACTGGTCTGAAA
AAATCGATGTCCTGAAACAGATAGAATCATATGGCATCGATTTGTCTTTTGATTATGAGCCTATTTCGGAATTATCTGTG
CATTATTCGGATAAAATGAAAACTGCCAGTGTAAAAAACGGCTGTTATCTGGTAAGGAGGGGAAGCAAAGAAGGCTGCCT
GGATAAAGCTTTACTTGAACAGGCTGAAAAATTGGGAGCGAAAATTCACTTTAATTACAGGCAGGACAGGAAAATGACTG
CTAAAGTGAATGCAACCGGTCCCAAAAAGGCAACTGCCTATGTAAGGGGAATCAAATTCAATACCAGATCCGAGATCGGC
TATCATATGGCTTTTGGACAGGATATAGCCAGAGGGTTTTACTCTTATCTCCTGACCAAAAATGGGCACGGAACGATTGC
AACCGTTTATGAGCGCAGGAGTACCCATCGTTCGGAAGAGTTCCTTCAAAACACAGTCAACTATTTTTCGGATTTTCTTG
ATAAAAAAGAAGTTGCTGCCGGAAAAAAATTTGGTGGTTATGGACAGTTTGAAATAAAAAACAATTATTATGATGAGAAC
GGGGCAATGCTCATCGGAGAAGCAGGAGGATTTCAGGACTATCTCTGGGGATTCGGAATGAGATACGCTTTTCAGAGCGC
GAATCTTGCTGCAAGAAGCATAATGCATAACGAATCATATAACGACCTGGTAGAGGAACATTTAATTAATAAAATGAAGC
ATTCAAACAGAAATAGACGAATTTCCGAAATTGCGGGCCCTCTGGCGTATCCTCTGCAGTATTATATGTTTACATTAAGT
AAGAATCCTCTTAAAATTTTGAATATTCTTTGCAGATGA

Upstream 100 bases:

>100_bases
CTGAACCAGATTGTCATCAATAAATTAATTTCTATATAAGGTATAGCTAAAACGAAATAAATATAAATATTTGAGAACCC
CAGTCTCTGCAGGTGTTTGG

Downstream 100 bases:

>100_bases
TTATAGATTATGATACTGGAGATCAAATTCATGTAGTGGGTGACAGCATATCTCCAGAATTTACCCTGTTTCAGGGGGGT
CAGCATGACTATCTGGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MDKEINILGGGISGLACAIILRNNGYKVNIYEKGSYVGKRFNDDWQGLENWSEKIDVLKQIESYGIDLSFDYEPISELSV
HYSDKMKTASVKNGCYLVRRGSKEGCLDKALLEQAEKLGAKIHFNYRQDRKMTAKVNATGPKKATAYVRGIKFNTRSEIG
YHMAFGQDIARGFYSYLLTKNGHGTIATVYERRSTHRSEEFLQNTVNYFSDFLDKKEVAAGKKFGGYGQFEIKNNYYDEN
GAMLIGEAGGFQDYLWGFGMRYAFQSANLAARSIMHNESYNDLVEEHLINKMKHSNRNRRISEIAGPLAYPLQYYMFTLS
KNPLKILNILCR

Sequences:

>Translated_332_residues
MDKEINILGGGISGLACAIILRNNGYKVNIYEKGSYVGKRFNDDWQGLENWSEKIDVLKQIESYGIDLSFDYEPISELSV
HYSDKMKTASVKNGCYLVRRGSKEGCLDKALLEQAEKLGAKIHFNYRQDRKMTAKVNATGPKKATAYVRGIKFNTRSEIG
YHMAFGQDIARGFYSYLLTKNGHGTIATVYERRSTHRSEEFLQNTVNYFSDFLDKKEVAAGKKFGGYGQFEIKNNYYDEN
GAMLIGEAGGFQDYLWGFGMRYAFQSANLAARSIMHNESYNDLVEEHLINKMKHSNRNRRISEIAGPLAYPLQYYMFTLS
KNPLKILNILCR
>Mature_332_residues
MDKEINILGGGISGLACAIILRNNGYKVNIYEKGSYVGKRFNDDWQGLENWSEKIDVLKQIESYGIDLSFDYEPISELSV
HYSDKMKTASVKNGCYLVRRGSKEGCLDKALLEQAEKLGAKIHFNYRQDRKMTAKVNATGPKKATAYVRGIKFNTRSEIG
YHMAFGQDIARGFYSYLLTKNGHGTIATVYERRSTHRSEEFLQNTVNYFSDFLDKKEVAAGKKFGGYGQFEIKNNYYDEN
GAMLIGEAGGFQDYLWGFGMRYAFQSANLAARSIMHNESYNDLVEEHLINKMKHSNRNRRISEIAGPLAYPLQYYMFTLS
KNPLKILNILCR

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37893; Mature: 37893

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEINILGGGISGLACAIILRNNGYKVNIYEKGSYVGKRFNDDWQGLENWSEKIDVLKQ
CCCEEEEECCCHHHEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
IESYGIDLSFDYEPISELSVHYSDKMKTASVKNGCYLVRRGSKEGCLDKALLEQAEKLGA
HHHHCCCEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
KIHFNYRQDRKMTAKVNATGPKKATAYVRGIKFNTRSEIGYHMAFGQDIARGFYSYLLTK
EEEECCCCCCEEEEEEECCCCCHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
NGHGTIATVYERRSTHRSEEFLQNTVNYFSDFLDKKEVAAGKKFGGYGQFEIKNNYYDEN
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCC
GAMLIGEAGGFQDYLWGFGMRYAFQSANLAARSIMHNESYNDLVEEHLINKMKHSNRNRR
CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
ISEIAGPLAYPLQYYMFTLSKNPLKILNILCR
HHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MDKEINILGGGISGLACAIILRNNGYKVNIYEKGSYVGKRFNDDWQGLENWSEKIDVLKQ
CCCEEEEECCCHHHEEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
IESYGIDLSFDYEPISELSVHYSDKMKTASVKNGCYLVRRGSKEGCLDKALLEQAEKLGA
HHHHCCCEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
KIHFNYRQDRKMTAKVNATGPKKATAYVRGIKFNTRSEIGYHMAFGQDIARGFYSYLLTK
EEEECCCCCCEEEEEEECCCCCHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
NGHGTIATVYERRSTHRSEEFLQNTVNYFSDFLDKKEVAAGKKFGGYGQFEIKNNYYDEN
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCC
GAMLIGEAGGFQDYLWGFGMRYAFQSANLAARSIMHNESYNDLVEEHLINKMKHSNRNRR
CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
ISEIAGPLAYPLQYYMFTLSKNPLKILNILCR
HHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA