Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227856

Identifier: 21227856

GI number: 21227856

Start: 2097514

End: 2098032

Strand: Direct

Name: 21227856

Synonym: MM_1754

Alternate gene names: NA

Gene position: 2097514-2098032 (Clockwise)

Preceding gene: 21227855

Following gene: 21227857

Centisome position: 51.2

GC content: 44.12

Gene sequence:

>519_bases
ATGGAAGAACTTAAACACGTTGTTTCAGCTCCTTTTAAGAAAAATCTTGCAGCTTCCCTTACGGAAAAGGACTTCGAGTT
TTCCCTCGCTTTCGACCTGAAATGGTTTTCTCCGAAAATAGCTTCCGAAGTGAAGGCACGTGCCCTTGAATCAGGGCTGC
TTTCCATGAAGGAAGGTGTAATTGTGCCCTGTTTTGATGTTGAAAGTGTCCGGCTCCCTCATGCTTTCAAGCCTCCTGAG
AATTTTCTTGAGCTCAAAGAAAAACCCGGAAAACCCGTAAGTGCCGTCCGCAACAGGGAAGAAATTTCCTTTGAACAGAT
CCTCGATTTTATTTCCGCAGATGCCGGAATAAACAAACAGAGGCTTGTCTCCGAGATCAATTCCATGCAGGAACGCCTCT
CTTATCTTGTGGATATCAGGGTAGTTGCACTTATTGTGGCAAAGAAGTTCGGATGCAATATAGAAAGGATACACGAAAAG
GTTTCCAGAACTGTTCTTGGCTTTTCCGATTACGCATAA

Upstream 100 bases:

>100_bases
TACATACTACTATTCCGGAAAGGCTGCGTACTGCTGCATACTACTACATTACTATAATATCACTATACTGAAGTTGCCAG
TTGTTTTTCGAGGCTCATTA

Downstream 100 bases:

>100_bases
TCTTTATGTACTAGAAATGTTATTCACATCATACCAATCCGACTACTCGCTTGATATTTAATTTACTGCCTCAGGCTTCT
GAGCTGCGGCAGTCATGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MEELKHVVSAPFKKNLAASLTEKDFEFSLAFDLKWFSPKIASEVKARALESGLLSMKEGVIVPCFDVESVRLPHAFKPPE
NFLELKEKPGKPVSAVRNREEISFEQILDFISADAGINKQRLVSEINSMQERLSYLVDIRVVALIVAKKFGCNIERIHEK
VSRTVLGFSDYA

Sequences:

>Translated_172_residues
MEELKHVVSAPFKKNLAASLTEKDFEFSLAFDLKWFSPKIASEVKARALESGLLSMKEGVIVPCFDVESVRLPHAFKPPE
NFLELKEKPGKPVSAVRNREEISFEQILDFISADAGINKQRLVSEINSMQERLSYLVDIRVVALIVAKKFGCNIERIHEK
VSRTVLGFSDYA
>Mature_172_residues
MEELKHVVSAPFKKNLAASLTEKDFEFSLAFDLKWFSPKIASEVKARALESGLLSMKEGVIVPCFDVESVRLPHAFKPPE
NFLELKEKPGKPVSAVRNREEISFEQILDFISADAGINKQRLVSEINSMQERLSYLVDIRVVALIVAKKFGCNIERIHEK
VSRTVLGFSDYA

Specific function: Unknown

COG id: COG3612

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19428; Mature: 19428

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELKHVVSAPFKKNLAASLTEKDFEFSLAFDLKWFSPKIASEVKARALESGLLSMKEGV
CHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCC
IVPCFDVESVRLPHAFKPPENFLELKEKPGKPVSAVRNREEISFEQILDFISADAGINKQ
EEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCHHCCCHHHHHHHHHCCCCCCHH
RLVSEINSMQERLSYLVDIRVVALIVAKKFGCNIERIHEKVSRTVLGFSDYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEELKHVVSAPFKKNLAASLTEKDFEFSLAFDLKWFSPKIASEVKARALESGLLSMKEGV
CHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCC
IVPCFDVESVRLPHAFKPPENFLELKEKPGKPVSAVRNREEISFEQILDFISADAGINKQ
EEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCHHCCCHHHHHHHHHCCCCCCHH
RLVSEINSMQERLSYLVDIRVVALIVAKKFGCNIERIHEKVSRTVLGFSDYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA