Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227821

Identifier: 21227821

GI number: 21227821

Start: 2064289

End: 2064714

Strand: Direct

Name: 21227821

Synonym: MM_1719

Alternate gene names: NA

Gene position: 2064289-2064714 (Clockwise)

Preceding gene: 21227820

Following gene: 21227822

Centisome position: 50.39

GC content: 38.73

Gene sequence:

>426_bases
TTGCTTATCTGTAGCTTCGCTGGATGTATAGGCCAAGAATCGATTGAGAATTCTTCTCAGACATCAGACAGTACTAATAC
ATCTGTAAGCAAAGGAGTAGATAATTTAGATATTAATTACTCTGCGATTGAAGTACTTCCACCTTATGATGAATCGGAGT
CAGAATGGCTCAAAACAGATGCTTCTAATATAGCTAAAATCGCACTCAAAGACAACCGTGTGAGACAGTTAATTCAGGAA
GGAGGGACAATAATGGGTGTGACTTATTCCTGTCATCCAACACCTGAAAATTATGACGGCCCAGGATGTGCTCCCGCTTT
GAGAATTCAGTCTGGAAACAAGATAGTAGATTTCCTGGTTGATGAAGAAAAAGAAGTAGTCGTTGAGACGGTTACAGAAA
TAAATCAAAATACTTCTACTGTTTAG

Upstream 100 bases:

>100_bases
ATAAAGTAGACAAAAAGGATATATGGAGGAAAAGAACTTGTTCACAGACTCTTTTTGTATTAAAAATAATAAATTTAAAG
TTATTTTCCTGACTATTTTT

Downstream 100 bases:

>100_bases
AGTTCCATGTTCAAAGAATCATACAAGCTTTATCCTGGTGAAAGGGCTTCAGAAGCAAAACCGTCCGGTCTTCAATATTC
TACTGGAATGAAAAAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLICSFAGCIGQESIENSSQTSDSTNTSVSKGVDNLDINYSAIEVLPPYDESESEWLKTDASNIAKIALKDNRVRQLIQE
GGTIMGVTYSCHPTPENYDGPGCAPALRIQSGNKIVDFLVDEEKEVVVETVTEINQNTSTV

Sequences:

>Translated_141_residues
MLICSFAGCIGQESIENSSQTSDSTNTSVSKGVDNLDINYSAIEVLPPYDESESEWLKTDASNIAKIALKDNRVRQLIQE
GGTIMGVTYSCHPTPENYDGPGCAPALRIQSGNKIVDFLVDEEKEVVVETVTEINQNTSTV
>Mature_141_residues
MLICSFAGCIGQESIENSSQTSDSTNTSVSKGVDNLDINYSAIEVLPPYDESESEWLKTDASNIAKIALKDNRVRQLIQE
GGTIMGVTYSCHPTPENYDGPGCAPALRIQSGNKIVDFLVDEEKEVVVETVTEINQNTSTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15290; Mature: 15290

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLICSFAGCIGQESIENSSQTSDSTNTSVSKGVDNLDINYSAIEVLPPYDESESEWLKTD
CEEECCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHCC
ASNIAKIALKDNRVRQLIQEGGTIMGVTYSCHPTPENYDGPGCAPALRIQSGNKIVDFLV
CCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEE
DEEKEVVVETVTEINQNTSTV
CCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLICSFAGCIGQESIENSSQTSDSTNTSVSKGVDNLDINYSAIEVLPPYDESESEWLKTD
CEEECCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHCC
ASNIAKIALKDNRVRQLIQEGGTIMGVTYSCHPTPENYDGPGCAPALRIQSGNKIVDFLV
CCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEE
DEEKEVVVETVTEINQNTSTV
CCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA