Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227772

Identifier: 21227772

GI number: 21227772

Start: 2000103

End: 2001113

Strand: Reverse

Name: 21227772

Synonym: MM_1670

Alternate gene names: NA

Gene position: 2001113-2000103 (Counterclockwise)

Preceding gene: 21227775

Following gene: 21227767

Centisome position: 48.85

GC content: 43.32

Gene sequence:

>1011_bases
ATGGGAAATAAGGGGAAGCTATGTTCAATAGCTTTAGCTTCATCAGTCCTGGTTTTTGTTTTTTTGGTTTTGATCTCAGC
CGCAGCTTCCGCGGCTCAAATTACGAAAATCGGAACCGGATACGACCCTGCTGTTTATGGTGATAAGGTGGTGTGGACAA
ACGGGGTCGTTATTCATCTATACGACCTGACAAACAGAACAGGCATCAGGTTTAGCTCTTCCGGGGCATCCAGTCCGGAT
ATTTATGAAAACAAAATAGTGTGGCATGATGAAAGTATTGGAACTCCAAGGATTGCTGTTTACGATATTCCGACAGCCAC
GAAAAGTTACATCACGCAGGAAGTAGACCAGTACAGCAGACCTGCTATTTATGACAACAGAATTGTCTGGAGCGCAAACG
ATAGCGTGTATCTGAGGGACATATCCAATTCCACACAGGAAAAAATAGGAAATGGCACCAATCCCGACATATATGGCACC
AAGGTAGTGTATTACTCATATTCAGAAGACCCGGAAGCGGATATAACTATCAGGATGTATGACATTGACACCGGGGAAAG
AAAAACTGTCGTTTCATACGGAGACCCAAACATACCGCGCATATGGGACACGAGGGTCATCTGGTCTGACGTATATAATC
ATCAGGGATATATTGCGATGTATGATATATTAACAGAGAATATCACAGACGTTACACACCCACTTGACACCGACCCGGAT
GGAAATGAATACGGCGCCAGCACAGGGACACATGTTTCCATACAGGATGATAAAATTGTATACAATAAATGTGTTGATGA
TTATGAAGGCAAACCCGGGGTGTACCTGTATAACATATCTGCAGGACAAAGCACACTGATATACGGTTATCCTGAAGAAG
TTTATACAACACCGGAAGTGTACAATAATACTATTGTATGGGGACTGGACAGGAACTATGTTGATGGTACGTCTGGCAAT
GATATCTATTTATGCGACCTCGCAGCCGGACCGGAAATCTCACAAACATAA

Upstream 100 bases:

>100_bases
TAGGACCCGAAAAATACAGAATATTATAGAACCCGAAAAATATCCAGAGTATATAAACTGTATATTAATTTGAAAAAGAA
AGATAACTGGGGGAAAATAA

Downstream 100 bases:

>100_bases
GTGGTGACGGCAGGTGGTGGATATCCACCACAACATTTTATTGAAAATCACAACATTTTGTTGAAAACCACAACATTTTA
TTGAAAAATGAATTCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MGNKGKLCSIALASSVLVFVFLVLISAAASAAQITKIGTGYDPAVYGDKVVWTNGVVIHLYDLTNRTGIRFSSSGASSPD
IYENKIVWHDESIGTPRIAVYDIPTATKSYITQEVDQYSRPAIYDNRIVWSANDSVYLRDISNSTQEKIGNGTNPDIYGT
KVVYYSYSEDPEADITIRMYDIDTGERKTVVSYGDPNIPRIWDTRVIWSDVYNHQGYIAMYDILTENITDVTHPLDTDPD
GNEYGASTGTHVSIQDDKIVYNKCVDDYEGKPGVYLYNISAGQSTLIYGYPEEVYTTPEVYNNTIVWGLDRNYVDGTSGN
DIYLCDLAAGPEISQT

Sequences:

>Translated_336_residues
MGNKGKLCSIALASSVLVFVFLVLISAAASAAQITKIGTGYDPAVYGDKVVWTNGVVIHLYDLTNRTGIRFSSSGASSPD
IYENKIVWHDESIGTPRIAVYDIPTATKSYITQEVDQYSRPAIYDNRIVWSANDSVYLRDISNSTQEKIGNGTNPDIYGT
KVVYYSYSEDPEADITIRMYDIDTGERKTVVSYGDPNIPRIWDTRVIWSDVYNHQGYIAMYDILTENITDVTHPLDTDPD
GNEYGASTGTHVSIQDDKIVYNKCVDDYEGKPGVYLYNISAGQSTLIYGYPEEVYTTPEVYNNTIVWGLDRNYVDGTSGN
DIYLCDLAAGPEISQT
>Mature_335_residues
GNKGKLCSIALASSVLVFVFLVLISAAASAAQITKIGTGYDPAVYGDKVVWTNGVVIHLYDLTNRTGIRFSSSGASSPDI
YENKIVWHDESIGTPRIAVYDIPTATKSYITQEVDQYSRPAIYDNRIVWSANDSVYLRDISNSTQEKIGNGTNPDIYGTK
VVYYSYSEDPEADITIRMYDIDTGERKTVVSYGDPNIPRIWDTRVIWSDVYNHQGYIAMYDILTENITDVTHPLDTDPDG
NEYGASTGTHVSIQDDKIVYNKCVDDYEGKPGVYLYNISAGQSTLIYGYPEEVYTTPEVYNNTIVWGLDRNYVDGTSGND
IYLCDLAAGPEISQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37302; Mature: 37170

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKGKLCSIALASSVLVFVFLVLISAAASAAQITKIGTGYDPAVYGDKVVWTNGVVIHL
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCEEEEECCEEEEE
YDLTNRTGIRFSSSGASSPDIYENKIVWHDESIGTPRIAVYDIPTATKSYITQEVDQYSR
EECCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCC
PAIYDNRIVWSANDSVYLRDISNSTQEKIGNGTNPDIYGTKVVYYSYSEDPEADITIRMY
CCEECCEEEEECCCCEEEEECCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEE
DIDTGERKTVVSYGDPNIPRIWDTRVIWSDVYNHQGYIAMYDILTENITDVTHPLDTDPD
ECCCCCCEEEEECCCCCCCCEECCEEEEHHHHCCCCEEEEEEHHHCCHHHHCCCCCCCCC
GNEYGASTGTHVSIQDDKIVYNKCVDDYEGKPGVYLYNISAGQSTLIYGYPEEVYTTPEV
CCCCCCCCCCEEEEECCEEEEEHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHEECHHH
YNNTIVWGLDRNYVDGTSGNDIYLCDLAAGPEISQT
HCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
GNKGKLCSIALASSVLVFVFLVLISAAASAAQITKIGTGYDPAVYGDKVVWTNGVVIHL
CCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCEEEEECCEEEEE
YDLTNRTGIRFSSSGASSPDIYENKIVWHDESIGTPRIAVYDIPTATKSYITQEVDQYSR
EECCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCC
PAIYDNRIVWSANDSVYLRDISNSTQEKIGNGTNPDIYGTKVVYYSYSEDPEADITIRMY
CCEECCEEEEECCCCEEEEECCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEE
DIDTGERKTVVSYGDPNIPRIWDTRVIWSDVYNHQGYIAMYDILTENITDVTHPLDTDPD
ECCCCCCEEEEECCCCCCCCEECCEEEEHHHHCCCCEEEEEEHHHCCHHHHCCCCCCCCC
GNEYGASTGTHVSIQDDKIVYNKCVDDYEGKPGVYLYNISAGQSTLIYGYPEEVYTTPEV
CCCCCCCCCCEEEEECCEEEEEHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHEECHHH
YNNTIVWGLDRNYVDGTSGNDIYLCDLAAGPEISQT
HCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA