| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is recG
Identifier: 21227770
GI number: 21227770
Start: 1996782
End: 1998233
Strand: Direct
Name: recG
Synonym: MM_1668
Alternate gene names: NA
Gene position: 1996782-1998233 (Clockwise)
Preceding gene: 21227769
Following gene: 21227771
Centisome position: 48.75
GC content: 39.26
Gene sequence:
>1452_bases TTGAAAAGGCTGCTTAAAGAGAAGGAAGGTATCCGTCTTGAATTCAAAGAGGCACGGACAGCTTTACCCGGAAATTTATT TGAGACAATCTGTTCCATGCTCAACCATGACGGGGGAGACATAGTTTTGGGAGTTAGTGACGATGGCACTGTAGCCGGAG TTGAACATGCAAAGATGGAAACAATGGTCAGCAATCTGGTCAACCTTTCAAATAATCCGCAGAAACTGGATCCTCCATTC ATATTATTTCCGCAAACGTATGAAATTGATGGCAAATGGCTCATCCACATTCAGGTTCCTTCCAGCTCACAGGTACACAA AACCTCCGGCATAGTGTTTAACCGCAGCAATGACGGGGATTTCAGAGTTACACAACCGCAACAAATAGCAGAGATATATA ACCGTAAAAGAATGCATTACACCGAAGGTATTATTTATCCCGGACTGCGCTTTGAAGATTTCAAAGTCGACCTGTTCCCA AAAGTCAGAAACCTTATAAGAAGTAACAATCCCAACCATCCCTGGCTGGCTCTTACCGATCAACAAATGTTAGAAAAAGC AGGGCTGTGGAAACGGGATATAAACAGTACACAGGAAGGTTATACCCTTGCAGCAGCTTTGTTGCTGGGAAAGGATGAAG TTATCCAGCAGTTGCTTCCATTTTTTAAAATTGATGCTCTTGTCCGTATCGAAGATATTTATCGTTACGATGACAGAGAA TATATCCAGACAAACCTGATCGAAGCCTATGAACAATTAATGACTTTTGTTGGCAAACACTTGCCCGATAAATTTTACAT GGAAGGAGATCAGCGAGTAAGTCTTCGGAATAAAATATTTCGAGAAATTGCTGCAAATTTGATAGTCCATAGAGAATATA TGAATGCTTACCCCTGCACATTCATAATCTATTCGGACAGGGTTGAAACTGAAAACGCCAATAATCCACATGGAGAAGGC CCTATAGATCCAGAACATTTTGCTCCGTTCCCAAAAAATCCCACTATTATCAAATTCTTCATGCAACTTGGGAGAGTAGA TGAACTCGGTTCCGGGATTTTAAATGTAAATCGATTTATTAAAGAATATGCTAACGGTGGCAGCTCTCAGTTTATTGAAG GAAATGTTTTCAAGATGATCATTCCTGTTGCTGGAGAGAAAATTGAGGGAGCAATTGAGGGAGCAATTGAGGGAGCAATT GAGGGAGCAATTGAGGGAGCAACTAAAAAAGTCAAAGATAAACTTGCCATTCTTTTAAAAGCGATAGCTGAAAATGAAGG TAAAAAAGTTCCTGATTATGTTGTCATTACTAAAATACCTAGAAGTAGCATTGAAAGATATATAAAACAATTAAGGGAAG CAAACTTAATAGATTTTCGTGATAAAGCAACACTGATTGGCGGTTATTACTTGACTAGTAAAATGAAACAAAAATTGAAG GAGAAGTCATAA
Upstream 100 bases:
>100_bases GCGGGGCAGAGGATTGGGAGCCGGCTGAGGTTTTGCTGGAAAGAATAAAAGCTGAAAAGGCGCAGAATGGAAAGAAGTGA GGAATATGGGTCTGGAAAGG
Downstream 100 bases:
>100_bases TAAAACATTATCTTGGATGGTAAAGGGCTGCCCAGCAGGCTACCCAGCAGGCTACCCAGCAAGCTACCGCGCAAGCTACC CCGCAAGTCACCGAGCAAGT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: Divergent AAA Domain Protein; ATP-Dependent DNA Helicase RecG; Divergent AAA Domain Family Protein; Divergent AAA ATP; ATPase; Divergent AAA ATPase; Divergent AAA Domain-Containing Protein; ATP-Dependent DNA Helicase; AAA-4 Family Protein
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MKRLLKEKEGIRLEFKEARTALPGNLFETICSMLNHDGGDIVLGVSDDGTVAGVEHAKMETMVSNLVNLSNNPQKLDPPF ILFPQTYEIDGKWLIHIQVPSSSQVHKTSGIVFNRSNDGDFRVTQPQQIAEIYNRKRMHYTEGIIYPGLRFEDFKVDLFP KVRNLIRSNNPNHPWLALTDQQMLEKAGLWKRDINSTQEGYTLAAALLLGKDEVIQQLLPFFKIDALVRIEDIYRYDDRE YIQTNLIEAYEQLMTFVGKHLPDKFYMEGDQRVSLRNKIFREIAANLIVHREYMNAYPCTFIIYSDRVETENANNPHGEG PIDPEHFAPFPKNPTIIKFFMQLGRVDELGSGILNVNRFIKEYANGGSSQFIEGNVFKMIIPVAGEKIEGAIEGAIEGAI EGAIEGATKKVKDKLAILLKAIAENEGKKVPDYVVITKIPRSSIERYIKQLREANLIDFRDKATLIGGYYLTSKMKQKLK EKS
Sequences:
>Translated_483_residues MKRLLKEKEGIRLEFKEARTALPGNLFETICSMLNHDGGDIVLGVSDDGTVAGVEHAKMETMVSNLVNLSNNPQKLDPPF ILFPQTYEIDGKWLIHIQVPSSSQVHKTSGIVFNRSNDGDFRVTQPQQIAEIYNRKRMHYTEGIIYPGLRFEDFKVDLFP KVRNLIRSNNPNHPWLALTDQQMLEKAGLWKRDINSTQEGYTLAAALLLGKDEVIQQLLPFFKIDALVRIEDIYRYDDRE YIQTNLIEAYEQLMTFVGKHLPDKFYMEGDQRVSLRNKIFREIAANLIVHREYMNAYPCTFIIYSDRVETENANNPHGEG PIDPEHFAPFPKNPTIIKFFMQLGRVDELGSGILNVNRFIKEYANGGSSQFIEGNVFKMIIPVAGEKIEGAIEGAIEGAI EGAIEGATKKVKDKLAILLKAIAENEGKKVPDYVVITKIPRSSIERYIKQLREANLIDFRDKATLIGGYYLTSKMKQKLK EKS >Mature_483_residues MKRLLKEKEGIRLEFKEARTALPGNLFETICSMLNHDGGDIVLGVSDDGTVAGVEHAKMETMVSNLVNLSNNPQKLDPPF ILFPQTYEIDGKWLIHIQVPSSSQVHKTSGIVFNRSNDGDFRVTQPQQIAEIYNRKRMHYTEGIIYPGLRFEDFKVDLFP KVRNLIRSNNPNHPWLALTDQQMLEKAGLWKRDINSTQEGYTLAAALLLGKDEVIQQLLPFFKIDALVRIEDIYRYDDRE YIQTNLIEAYEQLMTFVGKHLPDKFYMEGDQRVSLRNKIFREIAANLIVHREYMNAYPCTFIIYSDRVETENANNPHGEG PIDPEHFAPFPKNPTIIKFFMQLGRVDELGSGILNVNRFIKEYANGGSSQFIEGNVFKMIIPVAGEKIEGAIEGAIEGAI EGAIEGATKKVKDKLAILLKAIAENEGKKVPDYVVITKIPRSSIERYIKQLREANLIDFRDKATLIGGYYLTSKMKQKLK EKS
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55018; Mature: 55018
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLKEKEGIRLEFKEARTALPGNLFETICSMLNHDGGDIVLGVSDDGTVAGVEHAKME CCCHHHHCCCCEEEEHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECHHHHHHH TMVSNLVNLSNNPQKLDPPFILFPQTYEIDGKWLIHIQVPSSSQVHKTSGIVFNRSNDGD HHHHHHHHCCCCCCCCCCCEEECCCEEEECCEEEEEEECCCCCCCCCCCCEEEECCCCCC FRVTQPQQIAEIYNRKRMHYTEGIIYPGLRFEDFKVDLFPKVRNLIRSNNPNHPWLALTD EEECCHHHHHHHHHCCHHHHHCCEECCCCEEECCEEEHHHHHHHHHHCCCCCCCEEEECH QQMLEKAGLWKRDINSTQEGYTLAAALLLGKDEVIQQLLPFFKIDALVRIEDIYRYDDRE HHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YIQTNLIEAYEQLMTFVGKHLPDKFYMEGDQRVSLRNKIFREIAANLIVHREYMNAYPCT HHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE FIIYSDRVETENANNPHGEGPIDPEHFAPFPKNPTIIKFFMQLGRVDELGSGILNVNRFI EEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHH KEYANGGSSQFIEGNVFKMIIPVAGEKIEGAIEGAIEGAIEGAIEGATKKVKDKLAILLK HHHHCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIAENEGKKVPDYVVITKIPRSSIERYIKQLREANLIDFRDKATLIGGYYLTSKMKQKLK HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHH EKS CCC >Mature Secondary Structure MKRLLKEKEGIRLEFKEARTALPGNLFETICSMLNHDGGDIVLGVSDDGTVAGVEHAKME CCCHHHHCCCCEEEEHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECHHHHHHH TMVSNLVNLSNNPQKLDPPFILFPQTYEIDGKWLIHIQVPSSSQVHKTSGIVFNRSNDGD HHHHHHHHCCCCCCCCCCCEEECCCEEEECCEEEEEEECCCCCCCCCCCCEEEECCCCCC FRVTQPQQIAEIYNRKRMHYTEGIIYPGLRFEDFKVDLFPKVRNLIRSNNPNHPWLALTD EEECCHHHHHHHHHCCHHHHHCCEECCCCEEECCEEEHHHHHHHHHHCCCCCCCEEEECH QQMLEKAGLWKRDINSTQEGYTLAAALLLGKDEVIQQLLPFFKIDALVRIEDIYRYDDRE HHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YIQTNLIEAYEQLMTFVGKHLPDKFYMEGDQRVSLRNKIFREIAANLIVHREYMNAYPCT HHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE FIIYSDRVETENANNPHGEGPIDPEHFAPFPKNPTIIKFFMQLGRVDELGSGILNVNRFI EEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHH KEYANGGSSQFIEGNVFKMIIPVAGEKIEGAIEGAIEGAIEGAIEGATKKVKDKLAILLK HHHHCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIAENEGKKVPDYVVITKIPRSSIERYIKQLREANLIDFRDKATLIGGYYLTSKMKQKLK HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHH EKS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA