| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227764
Identifier: 21227764
GI number: 21227764
Start: 1989695
End: 1989910
Strand: Direct
Name: 21227764
Synonym: MM_1662
Alternate gene names: NA
Gene position: 1989695-1989910 (Clockwise)
Preceding gene: 21227763
Following gene: 21227768
Centisome position: 48.57
GC content: 36.57
Gene sequence:
>216_bases TTGGGTGAAAACCAGCTGGAGATAATCGAGAAAATAATAAATGATCCTCAAATCTCAATTGTAGAACTAAGTCAAAGAAT TGGAATTAGTACTACTGCAATTGAAAACAACATCGCAAAATTCAAAGAAAAGGGAATTTTGAAGCGTGTAGGTCCTGCAA AAGGCGGTCACTGGGAAGTTGACCTGGAACTTGCCGACACTTTTAATAAAACTTAA
Upstream 100 bases:
>100_bases GAAAACTGTGGTGAAGAGTGGGTGAAAAGTGGGTGAAAAGTTGGGTGAAAAGTTGGGTGAAAAGTTGGGTGAAAAGTTGG GTGAAAAGTTGGGTGAAAAG
Downstream 100 bases:
>100_bases TTTCTGAGATTGAGTTCGGAGAAAAGTTTGGAGAAAACTGTGGTGAAACTGTGGTGAAAGGTGTGGTGAAAATTAGTTAC TTGATTTGGAAAGATATTTC
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MGENQLEIIEKIINDPQISIVELSQRIGISTTAIENNIAKFKEKGILKRVGPAKGGHWEVDLELADTFNKT
Sequences:
>Translated_71_residues MGENQLEIIEKIINDPQISIVELSQRIGISTTAIENNIAKFKEKGILKRVGPAKGGHWEVDLELADTFNKT >Mature_70_residues GENQLEIIEKIINDPQISIVELSQRIGISTTAIENNIAKFKEKGILKRVGPAKGGHWEVDLELADTFNKT
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7904; Mature: 7773
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENQLEIIEKIINDPQISIVELSQRIGISTTAIENNIAKFKEKGILKRVGPAKGGHWEV CCCHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCEEE DLELADTFNKT EEEECCCCCCC >Mature Secondary Structure GENQLEIIEKIINDPQISIVELSQRIGISTTAIENNIAKFKEKGILKRVGPAKGGHWEV CCHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCEEE DLELADTFNKT EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA