| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227746
Identifier: 21227746
GI number: 21227746
Start: 1961700
End: 1962638
Strand: Direct
Name: 21227746
Synonym: MM_1644
Alternate gene names: NA
Gene position: 1961700-1962638 (Clockwise)
Preceding gene: 21227745
Following gene: 21227747
Centisome position: 47.89
GC content: 32.59
Gene sequence:
>939_bases ATGGATAATGTTACTAAAGGAAGCCTTCATTGCATAAATTGTCATTTTAATTTTGATATCGAAGAAGGAGTTTCTATTTT TGGTCTAAAGCTTGATCACAAGGAAGAAAGAATAAAAGAGATCAAAGCTGAAAATGAATGGACTTCTACTGCTAATGATC TACAATCTCATATAAATTTTGCAATGTCTAGTTCTAAAAAAGGTAAACAGATTATCGATTACATAGAAGCTTTTGATGAG AACTCTATGAATAGAAGAAAGGTGTTAGATATCGGGTCCGGTTGGGGGTGTTTTCAGGCCTGGCAGTTTGCGAGTAGGGG TTATGATGTAACCGCCACAGAGATATGCCCGGAATTTATCTTTGCATCAGATAAGGTGGTAAAAGAATGTTATTTTGAAA GAGTAATTACTGACTGTACAGTGCTACCTTTTAAGGATCAATCATTCGATATAGTATTTTGCAAGGAGACCCTTCATCAC ATCAATGACCCTAAATCTCTTTTAGACGAAATCTGGAGAGTTTGTTCTCCAAATGGACTAATTATCATCAAAGAACCCTG TGTGTCATCATTGCTAAAATTATTTATCACAAAGATTAATAGAGCAGCAAGAATTGGAATTACACATCATTTTCGCACAT CTAAAGAATATATGGAAACAATAACTGATATTACATCTAATCCTGTAATTAGCCGTGAAAGCTTCACAAAGGATTTTCGT TTTATTAGATACATACCATTTTCAGATTTTATAAATAATCTCTCGATAATTATCTTAGGATCCGACTTTGAAGTGTTTGG TATTAAACGAACAGACTATAAACCTGAGGTTCAGGTAAATAGAGAAATAATTCCAATAAATATAAATGAATTGAACCTTG CTCAAATTAAATATTATAGAGATGATCTAATTCCTGAAGTGTTAAAGCTTTTCTATTAA
Upstream 100 bases:
>100_bases TAGTAATAAAAGGGGGTTTATTGTGTATAAAAGTTTTTTGAATACTTTATCCTGTCCACGTTGTCTGGGAAATCTTAAAT TAAATGAAATTCAAAATGAG
Downstream 100 bases:
>100_bases TTTTTAAATACTTAGTTTCCCGTTTGGGTATTGTTTATTTAACTGGAATTCCCTGCAGCTTCCGGGAATGGGCAGATTTC CCGGAGTCTGTTGTTATATC
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDNVTKGSLHCINCHFNFDIEEGVSIFGLKLDHKEERIKEIKAENEWTSTANDLQSHINFAMSSSKKGKQIIDYIEAFDE NSMNRRKVLDIGSGWGCFQAWQFASRGYDVTATEICPEFIFASDKVVKECYFERVITDCTVLPFKDQSFDIVFCKETLHH INDPKSLLDEIWRVCSPNGLIIIKEPCVSSLLKLFITKINRAARIGITHHFRTSKEYMETITDITSNPVISRESFTKDFR FIRYIPFSDFINNLSIIILGSDFEVFGIKRTDYKPEVQVNREIIPININELNLAQIKYYRDDLIPEVLKLFY
Sequences:
>Translated_312_residues MDNVTKGSLHCINCHFNFDIEEGVSIFGLKLDHKEERIKEIKAENEWTSTANDLQSHINFAMSSSKKGKQIIDYIEAFDE NSMNRRKVLDIGSGWGCFQAWQFASRGYDVTATEICPEFIFASDKVVKECYFERVITDCTVLPFKDQSFDIVFCKETLHH INDPKSLLDEIWRVCSPNGLIIIKEPCVSSLLKLFITKINRAARIGITHHFRTSKEYMETITDITSNPVISRESFTKDFR FIRYIPFSDFINNLSIIILGSDFEVFGIKRTDYKPEVQVNREIIPININELNLAQIKYYRDDLIPEVLKLFY >Mature_312_residues MDNVTKGSLHCINCHFNFDIEEGVSIFGLKLDHKEERIKEIKAENEWTSTANDLQSHINFAMSSSKKGKQIIDYIEAFDE NSMNRRKVLDIGSGWGCFQAWQFASRGYDVTATEICPEFIFASDKVVKECYFERVITDCTVLPFKDQSFDIVFCKETLHH INDPKSLLDEIWRVCSPNGLIIIKEPCVSSLLKLFITKINRAARIGITHHFRTSKEYMETITDITSNPVISRESFTKDFR FIRYIPFSDFINNLSIIILGSDFEVFGIKRTDYKPEVQVNREIIPININELNLAQIKYYRDDLIPEVLKLFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36245; Mature: 36245
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNVTKGSLHCINCHFNFDIEEGVSIFGLKLDHKEERIKEIKAENEWTSTANDLQSHINF CCCCCCCCEEEEEEEEECCHHHCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHH AMSSSKKGKQIIDYIEAFDENSMNRRKVLDIGSGWGCFQAWQFASRGYDVTATEICPEFI HHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHH FASDKVVKECYFERVITDCTVLPFKDQSFDIVFCKETLHHINDPKSLLDEIWRVCSPNGL HCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCE IIIKEPCVSSLLKLFITKINRAARIGITHHFRTSKEYMETITDITSNPVISRESFTKDFR EEECCHHHHHHHHHHHHHHCCHHEECEEHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH FIRYIPFSDFINNLSIIILGSDFEVFGIKRTDYKPEVQVNREIIPININELNLAQIKYYR EEEECCHHHHHCCEEEEEECCCCEEEEEEECCCCCCEEECCEEEEEECCCCCHHHHHHHH DDLIPEVLKLFY HHHHHHHHHHHC >Mature Secondary Structure MDNVTKGSLHCINCHFNFDIEEGVSIFGLKLDHKEERIKEIKAENEWTSTANDLQSHINF CCCCCCCCEEEEEEEEECCHHHCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHH AMSSSKKGKQIIDYIEAFDENSMNRRKVLDIGSGWGCFQAWQFASRGYDVTATEICPEFI HHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHHHHH FASDKVVKECYFERVITDCTVLPFKDQSFDIVFCKETLHHINDPKSLLDEIWRVCSPNGL HCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCE IIIKEPCVSSLLKLFITKINRAARIGITHHFRTSKEYMETITDITSNPVISRESFTKDFR EEECCHHHHHHHHHHHHHHCCHHEECEEHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH FIRYIPFSDFINNLSIIILGSDFEVFGIKRTDYKPEVQVNREIIPININELNLAQIKYYR EEEECCHHHHHCCEEEEEECCCCEEEEEEECCCCCCEEECCEEEEEECCCCCHHHHHHHH DDLIPEVLKLFY HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA