| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227743
Identifier: 21227743
GI number: 21227743
Start: 1956060
End: 1957145
Strand: Direct
Name: 21227743
Synonym: MM_1641
Alternate gene names: NA
Gene position: 1956060-1957145 (Clockwise)
Preceding gene: 21227742
Following gene: 21227744
Centisome position: 47.75
GC content: 33.79
Gene sequence:
>1086_bases TTGATAAATAAAGGTGGGATGGTACACTATGTCTCGCAGCTTTGTAATTCTTTAGCTGATTTTAGTGCTGAATGTGATGT TTATCTAATTGCTCCAGAAGGTATTAATGAAAATCTCTTTAATAGTCGTGTAATTTTGAGAAAAATTCCTTCTATTGATC GACATGGGTATCGAATAGATCTGATGGTTAAGTATCTTTTGGATATTGGTCCCGATATCATACACACCAGTATGGTGCAT CCATTCATAGTTCCTTTACTACCGGTCTTAAAAAAAATAGCTCCTGTTGCTGCTACAGTGCATGACGTTCAGTTACATTC TGACCAAAAGAATCTCATCTGCGACATGAGTACATTAATTACTTCCAAACTTGCGGATTTGGATTTTGTCCATGGGGAAA AACTCAAATTAGAGTTGATTAAGAGAGGTGTTTTGAATTCAAAAATATCTATCATACCTCATGGGGATTACTCCTTTTTT AGCTCTATAATTCATAAAAAAATTAATGAAGAAGAAAATACAATTCTATTTTTTGGCAGAATACTTGAGTATAAAGGAAT AGATTATCTAATAAAAGCAGAGCCTCTGATATCCGAAAAAATACCCAATATTAAGATAATTATTGCTGGTAGTGGTGATT TCTCTAAATATGAAAGCATGATAAATCATAAAAATCACTTTGAAATAATCAACGAATATATCCCGGATGAGAAAGTTTCT GAATTATTTCAAAAGAGTTCAGTTGTCGTTCTTCCTTACGTTGAAGCGTCACAAACCGGGATAATTCCAATAGCTTACGC TTTTAAAAAACCTGTAGTTGCAACAGATGTGGGAAGCCTCTCGGAAGTTATTGTAGACGGTGTTACAGGCTTTATCGTAC CACCTAGAGATTCTAAACTTCTAGCCGATTCTTTATTAAATATCTTACTTAATAAAAATCTAAAGAATAGTATGGGTAGT GCAGCATATGAATTTATGAAAGAGAATATGTCATGGAAAGGGATTGCTCAAAAAACCATAGTAGAGTATCAAAAACTTCT GGGGAATTTCGAAAAACCCCGGTATTTAATAGGTAGCTTGCAGTAA
Upstream 100 bases:
>100_bases TTTAAAGGTGATTTTGAACATTTTGAATTATGAGGTTTCAAACAATCATTGAAATATAAACTGACTTGGGGGCGGTTTTA TTAGAATATGTTTCATTTTA
Downstream 100 bases:
>100_bases TTATCTACCTGTTTATACAAACAACACTCTTAAATAAAAAAAATTAAATTTCTCTTATTTGAGGATTAATTATCTTACCA GAAGAGGGACCATCTGATGA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MINKGGMVHYVSQLCNSLADFSAECDVYLIAPEGINENLFNSRVILRKIPSIDRHGYRIDLMVKYLLDIGPDIIHTSMVH PFIVPLLPVLKKIAPVAATVHDVQLHSDQKNLICDMSTLITSKLADLDFVHGEKLKLELIKRGVLNSKISIIPHGDYSFF SSIIHKKINEEENTILFFGRILEYKGIDYLIKAEPLISEKIPNIKIIIAGSGDFSKYESMINHKNHFEIINEYIPDEKVS ELFQKSSVVVLPYVEASQTGIIPIAYAFKKPVVATDVGSLSEVIVDGVTGFIVPPRDSKLLADSLLNILLNKNLKNSMGS AAYEFMKENMSWKGIAQKTIVEYQKLLGNFEKPRYLIGSLQ
Sequences:
>Translated_361_residues MINKGGMVHYVSQLCNSLADFSAECDVYLIAPEGINENLFNSRVILRKIPSIDRHGYRIDLMVKYLLDIGPDIIHTSMVH PFIVPLLPVLKKIAPVAATVHDVQLHSDQKNLICDMSTLITSKLADLDFVHGEKLKLELIKRGVLNSKISIIPHGDYSFF SSIIHKKINEEENTILFFGRILEYKGIDYLIKAEPLISEKIPNIKIIIAGSGDFSKYESMINHKNHFEIINEYIPDEKVS ELFQKSSVVVLPYVEASQTGIIPIAYAFKKPVVATDVGSLSEVIVDGVTGFIVPPRDSKLLADSLLNILLNKNLKNSMGS AAYEFMKENMSWKGIAQKTIVEYQKLLGNFEKPRYLIGSLQ >Mature_361_residues MINKGGMVHYVSQLCNSLADFSAECDVYLIAPEGINENLFNSRVILRKIPSIDRHGYRIDLMVKYLLDIGPDIIHTSMVH PFIVPLLPVLKKIAPVAATVHDVQLHSDQKNLICDMSTLITSKLADLDFVHGEKLKLELIKRGVLNSKISIIPHGDYSFF SSIIHKKINEEENTILFFGRILEYKGIDYLIKAEPLISEKIPNIKIIIAGSGDFSKYESMINHKNHFEIINEYIPDEKVS ELFQKSSVVVLPYVEASQTGIIPIAYAFKKPVVATDVGSLSEVIVDGVTGFIVPPRDSKLLADSLLNILLNKNLKNSMGS AAYEFMKENMSWKGIAQKTIVEYQKLLGNFEKPRYLIGSLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 40518; Mature: 40518
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKGGMVHYVSQLCNSLADFSAECDVYLIAPEGINENLFNSRVILRKIPSIDRHGYRID CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCHHHHHHCCCCCCCCEEHH LMVKYLLDIGPDIIHTSMVHPFIVPLLPVLKKIAPVAATVHDVQLHSDQKNLICDMSTLI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHH TSKLADLDFVHGEKLKLELIKRGVLNSKISIIPHGDYSFFSSIIHKKINEEENTILFFGR HHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEH ILEYKGIDYLIKAEPLISEKIPNIKIIIAGSGDFSKYESMINHKNHFEIINEYIPDEKVS HHHHCCCCEEEECCCHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCHHHH ELFQKSSVVVLPYVEASQTGIIPIAYAFKKPVVATDVGSLSEVIVDGVTGFIVPPRDSKL HHHHCCCEEEEEEECCCCCCCEEEEHHHCCCCEEECHHHHHHHHHHCCCEEEECCCCCHH LADSLLNILLNKNLKNSMGSAAYEFMKENMSWKGIAQKTIVEYQKLLGNFEKPRYLIGSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCC Q C >Mature Secondary Structure MINKGGMVHYVSQLCNSLADFSAECDVYLIAPEGINENLFNSRVILRKIPSIDRHGYRID CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCHHHHHHCCCCCCCCEEHH LMVKYLLDIGPDIIHTSMVHPFIVPLLPVLKKIAPVAATVHDVQLHSDQKNLICDMSTLI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHH TSKLADLDFVHGEKLKLELIKRGVLNSKISIIPHGDYSFFSSIIHKKINEEENTILFFGR HHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEH ILEYKGIDYLIKAEPLISEKIPNIKIIIAGSGDFSKYESMINHKNHFEIINEYIPDEKVS HHHHCCCCEEEECCCHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCHHHH ELFQKSSVVVLPYVEASQTGIIPIAYAFKKPVVATDVGSLSEVIVDGVTGFIVPPRDSKL HHHHCCCEEEEEEECCCCCCCEEEEHHHCCCCEEECHHHHHHHHHHCCCEEEECCCCCHH LADSLLNILLNKNLKNSMGSAAYEFMKENMSWKGIAQKTIVEYQKLLGNFEKPRYLIGSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]