| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is dapH [H]
Identifier: 21227741
GI number: 21227741
Start: 1954521
End: 1954973
Strand: Direct
Name: dapH [H]
Synonym: MM_1639
Alternate gene names: 21227741
Gene position: 1954521-1954973 (Clockwise)
Preceding gene: 21227740
Following gene: 21227742
Centisome position: 47.71
GC content: 39.96
Gene sequence:
>453_bases GTGATAAAATTCTATTTCCGTTACGCATTTAACTGGATATTACAAACAATGGCTAAAATTAGTCCTCATTACGGAATATC TGTAAAACTCCAGCGGATGAGAGGTGTAAATATCGGGAAACACGTATTTCTGGGGCCTGGTGTCAATCTCGATGATCTAT ACCCTGAATTAATTACAATTGAAGATTACGTCGGTATCGGAATGGGAACAATGATATTTGCGCATTCTAATCCCACCTGT TCCCCGTATCTTAAAACAAAGTACTATCCGAGGGAAGTAAAACCTGTAACTATAAAAAGTGGGGCATGGATTGCGCCCGG GAGCATAATTCTTGCAGGTATTACAATTGGGGAACATAGTGTTGTTGGCGCCGGGAGTATGGTTATGAAAAACGTAGAAC CTTATACGGTTGTAATTGGGTGTCCTGCTAAGGTTCTAAAGAAACTTGAATAA
Upstream 100 bases:
>100_bases AATGGAACGCTTTGAGGAAGCTAGCATACGTATGGAATGCCCTGAAAAAATTAACGAAAGAGAACTTATGGAGTATTATG GTTACACCGGTTCATTCGGG
Downstream 100 bases:
>100_bases TTAGTGCGGTTTACTTTGGGGATTTCTGGGGGGTTAAGAATGATTAATGCACTAAGTTTTGATCTGGAGTACTGGTATAC AGCAGAACTTGTTTGCAGAT
Product: putative acetyltransferase
Products: NA
Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase [H]
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITIEDYVGIGMGTMIFAHSNPTC SPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHSVVGAGSMVMKNVEPYTVVIGCPAKVLKKLE
Sequences:
>Translated_150_residues MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITIEDYVGIGMGTMIFAHSNPTC SPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHSVVGAGSMVMKNVEPYTVVIGCPAKVLKKLE >Mature_150_residues MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITIEDYVGIGMGTMIFAHSNPTC SPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHSVVGAGSMVMKNVEPYTVVIGCPAKVLKKLE
Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013710 - InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR019873 - InterPro: IPR011004 [H]
Pfam domain/function: PF08503 DapD_N; PF00132 Hexapep [H]
EC number: =2.3.1.89 [H]
Molecular weight: Translated: 16609; Mature: 16609
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITI CEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCCEEEE EDYVGIGMGTMIFAHSNPTCSPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHS CHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCEEEEEEEECCCC VVGAGSMVMKNVEPYTVVIGCPAKVLKKLE EECCCHHEECCCCCEEEEEECHHHHHHHCC >Mature Secondary Structure MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITI CEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCCEEEE EDYVGIGMGTMIFAHSNPTCSPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHS CHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCEEEEEEEECCCC VVGAGSMVMKNVEPYTVVIGCPAKVLKKLE EECCCHHEECCCCCEEEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA