Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227719

Identifier: 21227719

GI number: 21227719

Start: 1928691

End: 1929881

Strand: Direct

Name: 21227719

Synonym: MM_1617

Alternate gene names: NA

Gene position: 1928691-1929881 (Clockwise)

Preceding gene: 21227718

Following gene: 21227725

Centisome position: 47.08

GC content: 49.03

Gene sequence:

>1191_bases
ATGAAATCACTGGTCTTTAACCCTTTTTCAGGTGCAGCCGGAGATATGATTCTGGGGTGTGCCCTCGACCTCGGAGCCGA
CAGGGGAGAAGTAAAGGAATTAATCGAATCCTCGGCACCTGTATCTATGGATATCAGGGAGGTTGTGAAAAAAGGGATCA
AAGCCCTGGACGTACGCATAAATGTGCCTGAAAAAGAGTACTTCCGGACATACCCTGAAATTGTAGACCTTGTAAAGGCG
TCAAAACTGCCTTCAAAAGTAGAGGCAAGTGCCCTTGACATCTTTTTGAAAATGGCAGAAGCAGAGGCTGCGGTTCATGG
GCAGCCTGACCTTGAAAAGCTTCATTTCCACGAGGTGGGGCAGAGCGATGCCCTTGCCGATGTTATAGGCTCTTCTGCGG
CCATTCATTCCCTTAACTGTGATTCGGTTTACTGCACCCCTATCAATGTGGGCAGTGGAACAATAGAATGTGCGCATGGG
ACCCTGCCTGTGCCGGCTCCTGCTACCCTTGAGATTCTCAGGAGAGGAAAGCTCTATTTCAGGGGAGGAAATGTGAATAA
GGAACTGCTTACTCCAACAGGGGCTGCAATTCTTGCGCATTTTGCAAAGCCTGTTGACAATTTCCCTCAGGGCAGGGCAG
TTGCCATAGGATACGGCGCAGGGGATGCCGAGCTCCAGGGGCCCAATGTGCTCCAGGGAGTGCTGATAGAGCCTGATTCT
CATCTGGTTCCTGATATAATCGAAGTCCTTGAGACCAATGCTGACGATGTGAGTGGAGAAGTCCTGGGCAACCTCTTTGA
GGAACTGCTTTCAATGGGAGCCAGGGATGTTGCGATTATGCCCGCAACCATGAAAAAAGGCAGGCCTGCCCATATTATCA
AGGTTATTGCAAAGCCCGAAGACAGCGCAAAACTTGCCCGGAAAATAATAGTTGAAACAGGGTCTCTTGGAGTAAGAGTC
ATGCCTGCCAGGCACAGGTTAACAGCTTCCCGAAATATTGAAAGGATAAAAATTGATCTTGAAGGTCAGGAATTTGAAAC
TGCGGTCAAAATCGCCAGGGACTCGGAAGGGGTTCTTCTCAATATCTCTGCGGAATTTGAAGACTGCAAAAAAATTGCAA
AAACCAGCGGAGTTCCTGTAAGAGAGGTTATGCGCAGGGCAGAAGAGGCTGCAAGGAAGCTGTTTTCCTGA

Upstream 100 bases:

>100_bases
AATAACTGAAGAAACGGAACAGGAAGAAACCGGAGAGTAATAATATCTTGAAAACGACGAACGAGGACGGGTTCAAAAGT
AAAATTCAGGGAGGTAATTT

Downstream 100 bases:

>100_bases
ATACTGCCGGAAACCGGGAAATTTGGAAAATTACTCCAGGAGAAATAAAAATCAATCTCTGACTTTATAAAAATAAATTT
AAAACAGAGATTTTTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKSLVFNPFSGAAGDMILGCALDLGADRGEVKELIESSAPVSMDIREVVKKGIKALDVRINVPEKEYFRTYPEIVDLVKA
SKLPSKVEASALDIFLKMAEAEAAVHGQPDLEKLHFHEVGQSDALADVIGSSAAIHSLNCDSVYCTPINVGSGTIECAHG
TLPVPAPATLEILRRGKLYFRGGNVNKELLTPTGAAILAHFAKPVDNFPQGRAVAIGYGAGDAELQGPNVLQGVLIEPDS
HLVPDIIEVLETNADDVSGEVLGNLFEELLSMGARDVAIMPATMKKGRPAHIIKVIAKPEDSAKLARKIIVETGSLGVRV
MPARHRLTASRNIERIKIDLEGQEFETAVKIARDSEGVLLNISAEFEDCKKIAKTSGVPVREVMRRAEEAARKLFS

Sequences:

>Translated_396_residues
MKSLVFNPFSGAAGDMILGCALDLGADRGEVKELIESSAPVSMDIREVVKKGIKALDVRINVPEKEYFRTYPEIVDLVKA
SKLPSKVEASALDIFLKMAEAEAAVHGQPDLEKLHFHEVGQSDALADVIGSSAAIHSLNCDSVYCTPINVGSGTIECAHG
TLPVPAPATLEILRRGKLYFRGGNVNKELLTPTGAAILAHFAKPVDNFPQGRAVAIGYGAGDAELQGPNVLQGVLIEPDS
HLVPDIIEVLETNADDVSGEVLGNLFEELLSMGARDVAIMPATMKKGRPAHIIKVIAKPEDSAKLARKIIVETGSLGVRV
MPARHRLTASRNIERIKIDLEGQEFETAVKIARDSEGVLLNISAEFEDCKKIAKTSGVPVREVMRRAEEAARKLFS
>Mature_396_residues
MKSLVFNPFSGAAGDMILGCALDLGADRGEVKELIESSAPVSMDIREVVKKGIKALDVRINVPEKEYFRTYPEIVDLVKA
SKLPSKVEASALDIFLKMAEAEAAVHGQPDLEKLHFHEVGQSDALADVIGSSAAIHSLNCDSVYCTPINVGSGTIECAHG
TLPVPAPATLEILRRGKLYFRGGNVNKELLTPTGAAILAHFAKPVDNFPQGRAVAIGYGAGDAELQGPNVLQGVLIEPDS
HLVPDIIEVLETNADDVSGEVLGNLFEELLSMGARDVAIMPATMKKGRPAHIIKVIAKPEDSAKLARKIIVETGSLGVRV
MPARHRLTASRNIERIKIDLEGQEFETAVKIARDSEGVLLNISAEFEDCKKIAKTSGVPVREVMRRAEEAARKLFS

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1617_METMA (Q8PWH0)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633641.1
- ProteinModelPortal:   Q8PWH0
- SMR:   Q8PWH0
- GeneID:   1479959
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1617
- NMPDR:   fig|192952.1.peg.1617
- HOGENOM:   HBG733311
- OMA:   IVGTCLG
- ProtClustDB:   PRK04194
- BioCyc:   MMAZ192952:MM1617-MONOMER
- HAMAP:   MF_01074
- InterPro:   IPR002822
- TIGRFAMs:   TIGR00299

Pfam domain/function: PF01969 DUF111

EC number: NA

Molecular weight: Translated: 42553; Mature: 42553

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLVFNPFSGAAGDMILGCALDLGADRGEVKELIESSAPVSMDIREVVKKGIKALDVRI
CCCCEECCCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHEEEEEE
NVPEKEYFRTYPEIVDLVKASKLPSKVEASALDIFLKMAEAEAAVHGQPDLEKLHFHEVG
ECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
QSDALADVIGSSAAIHSLNCDSVYCTPINVGSGTIECAHGTLPVPAPATLEILRRGKLYF
CCHHHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCCCEEE
RGGNVNKELLTPTGAAILAHFAKPVDNFPQGRAVAIGYGAGDAELQGPNVLQGVLIEPDS
ECCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCC
HLVPDIIEVLETNADDVSGEVLGNLFEELLSMGARDVAIMPATMKKGRPAHIIKVIAKPE
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCEEEEEEEECCC
DSAKLARKIIVETGSLGVRVMPARHRLTASRNIERIKIDLEGQEFETAVKIARDSEGVLL
HHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCEEE
NISAEFEDCKKIAKTSGVPVREVMRRAEEAARKLFS
EEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLVFNPFSGAAGDMILGCALDLGADRGEVKELIESSAPVSMDIREVVKKGIKALDVRI
CCCCEECCCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHEEEEEE
NVPEKEYFRTYPEIVDLVKASKLPSKVEASALDIFLKMAEAEAAVHGQPDLEKLHFHEVG
ECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
QSDALADVIGSSAAIHSLNCDSVYCTPINVGSGTIECAHGTLPVPAPATLEILRRGKLYF
CCHHHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCCCEEE
RGGNVNKELLTPTGAAILAHFAKPVDNFPQGRAVAIGYGAGDAELQGPNVLQGVLIEPDS
ECCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCC
HLVPDIIEVLETNADDVSGEVLGNLFEELLSMGARDVAIMPATMKKGRPAHIIKVIAKPE
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCEEEEEEEECCC
DSAKLARKIIVETGSLGVRVMPARHRLTASRNIERIKIDLEGQEFETAVKIARDSEGVLL
HHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCEEE
NISAEFEDCKKIAKTSGVPVREVMRRAEEAARKLFS
EEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12125824