| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yajO [C]
Identifier: 21227717
GI number: 21227717
Start: 1926295
End: 1927491
Strand: Direct
Name: yajO [C]
Synonym: MM_1615
Alternate gene names: 21227717
Gene position: 1926295-1927491 (Clockwise)
Preceding gene: 21227716
Following gene: 21227718
Centisome position: 47.02
GC content: 46.95
Gene sequence:
>1197_bases ATGCTTTACAGAAAAATGCCCAAGAACGGAGATGAACTTTCTATACTTGGATTCGGGTGCATGCGCCTTCCGATGAAAGA AGACGGTAGTATAGATGAAGACAGAGCCACCAGGCAGGTACGTTATGCAATCGACCACGGAGTAAACTATGTCGATACGG CCTGGCCCTATCATATGGAACAGAGCGAGCCTTTCCTGGGCCGTGCTCTTGCTGACGGATATCGAGAAAAGGTTAAACTT GCCACAAAGCTTCCTTCCTGGCTTATAAAGAGCCGGGAGGATATGGATAAGTTTCTGGACGCTCAGCTGAAGAAACTTAA TATTGACCACATCGACTATTACCTCATCCACGCTCTCGTTGGTGACCTGTGGGATTATATTGAAAAACTGGGTATAGCCG ATTTTCTTGACAAAGCTAGAGCTGACGGCCGTATAATTAACGCAGGTTTTTCCTTCCACGGCTCGGGAGATGAGTTCAAA AGGATAGTGGATGCCTATGACTGGGACTTTTGTCAGATCCAGTACAACTTCCTGGATGAAAAGAACCAGGCAGGCACTGA AGGTCTGGAATATGCAGCTTCAAAAGGCCTTGGAGTAATCATTATGGAACCCCTCCGTGGAGGGTACCTTGCAAACCCTG TCCCTCCTGCTGTCCAGGAGATCTGGGATGAAGCTTCTACAAAAAGGACCGCTGCAGAATGGGCTCTTCTCTGGGTATGG AACCACCCAGAGGTCACGGTTGTTCTCTCCGGGATGAATGAAGAAACACATATTGAAGAGAATCTCGCAGTAGCAGACAA AGCATACCCGAATTCTCTTACTGAAGCTGAAATACAGCTCGTAAAGAAAGTAGAGCGGAAATATCGTGAACTTATGAAAG CAGGATGTACAGGGTGCAGATATTGTATGCCCTGTCCGGAAGGGGTGAATATTCCATTATGTTTCGAAACGTACAATACT CTATATATGTCCGGCAATGCAGACGAGACTAAGTTCATGTATGCTGCAAGGTTGGGCGGGGTACTATCCGGTGGAGAGCC TGAATTTGCATCCCTGTGCGTACAATGTGGAGAATGTCTTGAGAAATGCCCCCAGCACCTTGATATCCCAACGATTCTTG AATCCGTTGTAGAAGAGCTTGAAGGGTCCGACCTGGAGGAGAGAGTTGCCATAGCAAAACAGATATTCAAGAAGTAG
Upstream 100 bases:
>100_bases TGGAGAGGTCTGGCTAAAGTGTAATTTTTTTCATTTCATGTGTGAGTGATCAGTCAATCAAAAACGGGCAAAACAATTTA AAAATTCAGGAGAACTAAAA
Downstream 100 bases:
>100_bases ACTTAAAGTAGAAGCAATCCGAAGTGCTGAAAAGAGAAAATGAAGGTATTGTTTAAGCTGACTTTTATCAAACAATTAAA CAATATCCCCATTTTTCCGC
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Aldo/Keto Reductase Family Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family; Aldo/Keto Reductase Family Protein; Oxidoreductase Of Aldo/Keto Reductase Family; Fe-S Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase; D-Threo-Aldose 1-Dehydrogenase; Twin-Arginine Translocation Pathway Signal Protein; Aldoketoreductase; Adol/Keto Oxidoreductase; NADPH-Dependent Oxidoreductase; Oxidoreductase-Like Protein; Aldo/Keto Reductase Ferredoxin Subunit
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MLYRKMPKNGDELSILGFGCMRLPMKEDGSIDEDRATRQVRYAIDHGVNYVDTAWPYHMEQSEPFLGRALADGYREKVKL ATKLPSWLIKSREDMDKFLDAQLKKLNIDHIDYYLIHALVGDLWDYIEKLGIADFLDKARADGRIINAGFSFHGSGDEFK RIVDAYDWDFCQIQYNFLDEKNQAGTEGLEYAASKGLGVIIMEPLRGGYLANPVPPAVQEIWDEASTKRTAAEWALLWVW NHPEVTVVLSGMNEETHIEENLAVADKAYPNSLTEAEIQLVKKVERKYRELMKAGCTGCRYCMPCPEGVNIPLCFETYNT LYMSGNADETKFMYAARLGGVLSGGEPEFASLCVQCGECLEKCPQHLDIPTILESVVEELEGSDLEERVAIAKQIFKK
Sequences:
>Translated_398_residues MLYRKMPKNGDELSILGFGCMRLPMKEDGSIDEDRATRQVRYAIDHGVNYVDTAWPYHMEQSEPFLGRALADGYREKVKL ATKLPSWLIKSREDMDKFLDAQLKKLNIDHIDYYLIHALVGDLWDYIEKLGIADFLDKARADGRIINAGFSFHGSGDEFK RIVDAYDWDFCQIQYNFLDEKNQAGTEGLEYAASKGLGVIIMEPLRGGYLANPVPPAVQEIWDEASTKRTAAEWALLWVW NHPEVTVVLSGMNEETHIEENLAVADKAYPNSLTEAEIQLVKKVERKYRELMKAGCTGCRYCMPCPEGVNIPLCFETYNT LYMSGNADETKFMYAARLGGVLSGGEPEFASLCVQCGECLEKCPQHLDIPTILESVVEELEGSDLEERVAIAKQIFKK >Mature_398_residues MLYRKMPKNGDELSILGFGCMRLPMKEDGSIDEDRATRQVRYAIDHGVNYVDTAWPYHMEQSEPFLGRALADGYREKVKL ATKLPSWLIKSREDMDKFLDAQLKKLNIDHIDYYLIHALVGDLWDYIEKLGIADFLDKARADGRIINAGFSFHGSGDEFK RIVDAYDWDFCQIQYNFLDEKNQAGTEGLEYAASKGLGVIIMEPLRGGYLANPVPPAVQEIWDEASTKRTAAEWALLWVW NHPEVTVVLSGMNEETHIEENLAVADKAYPNSLTEAEIQLVKKVERKYRELMKAGCTGCRYCMPCPEGVNIPLCFETYNT LYMSGNADETKFMYAARLGGVLSGGEPEFASLCVQCGECLEKCPQHLDIPTILESVVEELEGSDLEERVAIAKQIFKK
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081735, Length=326, Percent_Identity=26.3803680981595, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212645785, Length=311, Percent_Identity=25.4019292604502, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 45043; Mature: 45043
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRKMPKNGDELSILGFGCMRLPMKEDGSIDEDRATRQVRYAIDHGVNYVDTAWPYHME CCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QSEPFLGRALADGYREKVKLATKLPSWLIKSREDMDKFLDAQLKKLNIDHIDYYLIHALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GDLWDYIEKLGIADFLDKARADGRIINAGFSFHGSGDEFKRIVDAYDWDFCQIQYNFLDE HHHHHHHHHHCHHHHHHHHCCCCEEEECCCEECCCCHHHHHHHHHCCCCEEEEEEEHHCC KNQAGTEGLEYAASKGLGVIIMEPLRGGYLANPVPPAVQEIWDEASTKRTAAEWALLWVW CCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEE NHPEVTVVLSGMNEETHIEENLAVADKAYPNSLTEAEIQLVKKVERKYRELMKAGCTGCR CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC YCMPCPEGVNIPLCFETYNTLYMSGNADETKFMYAARLGGVLSGGEPEFASLCVQCGECL CCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH EKCPQHLDIPTILESVVEELEGSDLEERVAIAKQIFKK HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLYRKMPKNGDELSILGFGCMRLPMKEDGSIDEDRATRQVRYAIDHGVNYVDTAWPYHME CCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QSEPFLGRALADGYREKVKLATKLPSWLIKSREDMDKFLDAQLKKLNIDHIDYYLIHALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GDLWDYIEKLGIADFLDKARADGRIINAGFSFHGSGDEFKRIVDAYDWDFCQIQYNFLDE HHHHHHHHHHCHHHHHHHHCCCCEEEECCCEECCCCHHHHHHHHHCCCCEEEEEEEHHCC KNQAGTEGLEYAASKGLGVIIMEPLRGGYLANPVPPAVQEIWDEASTKRTAAEWALLWVW CCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEE NHPEVTVVLSGMNEETHIEENLAVADKAYPNSLTEAEIQLVKKVERKYRELMKAGCTGCR CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC YCMPCPEGVNIPLCFETYNTLYMSGNADETKFMYAARLGGVLSGGEPEFASLCVQCGECL CCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH EKCPQHLDIPTILESVVEELEGSDLEERVAIAKQIFKK HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA