Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227715

Identifier: 21227715

GI number: 21227715

Start: 1924782

End: 1925372

Strand: Direct

Name: 21227715

Synonym: MM_1613

Alternate gene names: NA

Gene position: 1924782-1925372 (Clockwise)

Preceding gene: 21227714

Following gene: 21227716

Centisome position: 46.99

GC content: 42.3

Gene sequence:

>591_bases
TTGCTTTTGATGACAAATGTTGACAATATCACATGTGAGCAGGTCCCCTATCTGATTGAAGAATTGATGAAGCTCGGAGC
TAAAAATGTACATGTAGTGCCAGCCATTACTAAAAAGGGAAGACCTGAGCACATCTTCCTGATTGACAGTGAGGAAGAAA
CTCTTGATTCCCTTGCAGAGTTCATGGCACTGGAGACCGGTGCTCTTGGTGTCAGGGTTCTAACTACAGAGCATTATCCA
TTCGATTATGAAATAAAAAAGCTTTTTATATCTTTTCTTGATGGGTCTGAAACGCCGTTATGGGAAGGGAACATAAGCCT
GAAAATTGTTAAAGGGAAAAACCAGAAGCCGCTTTCTGCCAGGGTGGAGTACGAAGAACTTAAGGAACTGTCAGGCAGGG
TAAAAGAAGCTGGCCTGAAGCTTTCCATGTACGAAATTAAGGAATTGATTGAAGAAAGAGCTCTGAAAGGCATAAAGGAC
TTTACTATCAATTTCAACGGCTGCGGTTCGGAACCGGACAGCGAGTCTCTGTTCCCTGTTTCAAAAAAACTGTGCTGTAA
AGATGAGACGAAAATCTGTTTCGGCAATTGA

Upstream 100 bases:

>100_bases
AACGGCCTGAATTCCGGGCAAAGGTAAAAGGGTCCGACTTACAGGTTTAACCTTTTTACCTTTGCCTTATTTTTTTCTGT
AAAACGCCGGAGGTCTACTT

Downstream 100 bases:

>100_bases
ATCTCGCTTTTACTTTTTTAGGTTTAAGGCGTCTTTTTTCAAAGATCTTTATTATCCTGAAATTTTTTTCCGTGAAAGGT
ATTTTTACCGTGAAGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLLMTNVDNITCEQVPYLIEELMKLGAKNVHVVPAITKKGRPEHIFLIDSEEETLDSLAEFMALETGALGVRVLTTEHYP
FDYEIKKLFISFLDGSETPLWEGNISLKIVKGKNQKPLSARVEYEELKELSGRVKEAGLKLSMYEIKELIEERALKGIKD
FTINFNGCGSEPDSESLFPVSKKLCCKDETKICFGN

Sequences:

>Translated_196_residues
MLLMTNVDNITCEQVPYLIEELMKLGAKNVHVVPAITKKGRPEHIFLIDSEEETLDSLAEFMALETGALGVRVLTTEHYP
FDYEIKKLFISFLDGSETPLWEGNISLKIVKGKNQKPLSARVEYEELKELSGRVKEAGLKLSMYEIKELIEERALKGIKD
FTINFNGCGSEPDSESLFPVSKKLCCKDETKICFGN
>Mature_196_residues
MLLMTNVDNITCEQVPYLIEELMKLGAKNVHVVPAITKKGRPEHIFLIDSEEETLDSLAEFMALETGALGVRVLTTEHYP
FDYEIKKLFISFLDGSETPLWEGNISLKIVKGKNQKPLSARVEYEELKELSGRVKEAGLKLSMYEIKELIEERALKGIKD
FTINFNGCGSEPDSESLFPVSKKLCCKDETKICFGN

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002822 [H]

Pfam domain/function: PF01969 DUF111 [H]

EC number: NA

Molecular weight: Translated: 22124; Mature: 22124

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLMTNVDNITCEQVPYLIEELMKLGAKNVHVVPAITKKGRPEHIFLIDSEEETLDSLAE
CEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHH
FMALETGALGVRVLTTEHYPFDYEIKKLFISFLDGSETPLWEGNISLKIVKGKNQKPLSA
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCEEEEEEECCCCCCCEE
RVEYEELKELSGRVKEAGLKLSMYEIKELIEERALKGIKDFTINFNGCGSEPDSESLFPV
ECCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
SKKLCCKDETKICFGN
CHHHCCCCCCEEEECC
>Mature Secondary Structure
MLLMTNVDNITCEQVPYLIEELMKLGAKNVHVVPAITKKGRPEHIFLIDSEEETLDSLAE
CEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHH
FMALETGALGVRVLTTEHYPFDYEIKKLFISFLDGSETPLWEGNISLKIVKGKNQKPLSA
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCEEEEEEECCCCCCCEE
RVEYEELKELSGRVKEAGLKLSMYEIKELIEERALKGIKDFTINFNGCGSEPDSESLFPV
ECCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
SKKLCCKDETKICFGN
CHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA