| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227714
Identifier: 21227714
GI number: 21227714
Start: 1922845
End: 1924635
Strand: Direct
Name: 21227714
Synonym: MM_1612
Alternate gene names: NA
Gene position: 1922845-1924635 (Clockwise)
Preceding gene: 21227709
Following gene: 21227715
Centisome position: 46.94
GC content: 49.13
Gene sequence:
>1791_bases TTGAATAACGAAGTTTATGCTGCAGTAATGGCTTCAATTTCAGGTATCCAGAATCTTACAAATGACAGGATTGAAGCTCT TACCAAAGGTCATGGAATGACAAACATCGGCGCGATGTGTGCTGCAAATGCTATTGCTACAGAGCTTTTCCGGGGTGCCA ATATCACGCTTACAGATGAAGACAGCGGCAGCCTGGAAATTGATCATGTACTCAAAAAAGGCATTGAAGCCGCAGAAGAA GCCGGAGCAAGCCCGGCAAACGCAGCCCTTTTTGCAGCTACAATCTGCTACTTTGCAGGTTCAAATGCCCAGGCCGGAGT CCCTGCAGGGAACCGGAAAATAGGAGCTCTTGCTCGCATGATCGCAGGAGCCGACAGGACAGGGGTTATAGCCATTCCCA CTCCAAAGTCAAATAACAAGGTCTCAGGCTTTGCAGCCGTACAGGCTATTTACAGTGCCATGGCAGAAGGCAAACTCACA AAAATTGACGGGCGGAAACTTCCTCTTGGGGTTGCAGGCGGCCCCCTTTATGGGCACAACACCCTTGGTGAAGACATAGG ATTTCCGGAAGTATCCATGAACGCTGCAAAGATAGGGACAGAAGCTATGATGCAGGCTTACTGGGGAGCAGGCATTTCCG CAAGTCCTATTATTTCTGCAGTACTCGGAGCTGCAGCAGCTCTTGAAATCGTGCACCCTGATGCTTTTGTTGGTGAGGAG TACGGCGGCTTTTTTGATGTGAACAGTGCCTATCTTGCAGGAAAAGCTGCCTGTCAGGCTGCAGGCATTCCGGAAAAACT CCATATGCGCGGTACAGACGAAGAGTACGATTCTTTCAGGCTCGTAGGAGACCTTGGAGTTATCCTGAAAGATATAGGTG CTCCCACTGTAGTGGGGATGATGTCTTTTGGCGAGATGCTGTGCGCATTTAAGGAATCGGTTGAAATCGGAGCCGGATTT TCCGGAGGACCTATAATGCCTCCTCTCGGACATATGACTGCGGACACAATAATTACCCTCAGGTCCCTGATAAAGTTTGA AGGCGATATTGAGCAGGCTGCAGATGTCATTGCAGAGGTGAAAAAGAATGAATGGCTTGACCCGGAAATTGCCGCGGTTG CCCTTAATACAATTGCCCGAAAAACCGAACAGGTCAGGAGAGGCCCCATTACGCGTACCATGATACTTGGGACTGACGGG GTCCGCTCAGCTGCTATCGTCAGAAGGGCAAAAAAGGCATATGAGGATATAAAATCCGGAAAGTCCGTTGAGGATGTCGT GAAAGAACTCGACCTGGAAAGGAAGAAAACTGTCGAAACAAGGGCTGCTGCGATGCTTGGAGCCATGACAGGACACGAAG TCAGGATTGAGATTACGAAAATGGTTGGAGGTGCCCGCCGTAGCCATCCCTTTACTACTTCATATTACGGGTTTGATACA GATGCCGATGTTAAACTGACTGTAGACGGCAGGACTTTTGAACTTCTGGGGCTTGGGCAGAATGTGATCCCTGATGCTAT TTTCAACGATCGAAAGGAGCTTCTGGAAATTATCCCCCTGGCAGCCATACCGGTCTGTGAACTCCAGCTTTCTGGGCACT CGATTATTAACATTACGGTGCCTGCAGCCGTTGCAGCTGCGATGAAAGTTGCCGATCCAAAAGAAGCTGCAAAACTTGCG GAAAAAGGAGGAAAGTCCTGTTCAGCTGCAATTCCGGGAGCCCGGGAAAAAGCAACGGATGTTGCAAAACTGGCTGTCAG GATAATGAAATCCATGGAATGCATTGAGTAA
Upstream 100 bases:
>100_bases AATATAGTCACAGTGTTAATGAATAACTATTTACATGACGAATTTTAAACTATTGAGAAAAAATCATCTCGAATTATTTT TTTAAAGGAGGCAAATTTTT
Downstream 100 bases:
>100_bases ATCCCGATGAACACACACCAATCCAAAAAATCCACCAAACCACAAAAACGGCCTGAATTCCGGGCAAAGGTAAAAGGGTC CGACTTACAGGTTTAACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDEDSGSLEIDHVLKKGIEAAEE AGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARMIAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLT KIDGRKLPLGVAGGPLYGHNTLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGMMSFGEMLCAFKESVEIGAGF SGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEVKKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDG VRSAAIVRRAKKAYEDIKSGKSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITVPAAVAAAMKVADPKEAAKLA EKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE
Sequences:
>Translated_596_residues MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDEDSGSLEIDHVLKKGIEAAEE AGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARMIAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLT KIDGRKLPLGVAGGPLYGHNTLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGMMSFGEMLCAFKESVEIGAGF SGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEVKKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDG VRSAAIVRRAKKAYEDIKSGKSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITVPAAVAAAMKVADPKEAAKLA EKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE >Mature_596_residues MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDEDSGSLEIDHVLKKGIEAAEE AGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARMIAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLT KIDGRKLPLGVAGGPLYGHNTLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGMMSFGEMLCAFKESVEIGAGF SGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEVKKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDG VRSAAIVRRAKKAYEDIKSGKSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITVPAAVAAAMKVADPKEAAKLA EKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62525; Mature: 62525
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC DSGSLEIDHVLKKGIEAAEEAGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARM CCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH IAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLTKIDGRKLPLGVAGGPLYGHN HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCC TLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCHHCCCC YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGM CCCEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHEEEHHHHHHHHHHCCCCHHHHH MSFGEMLCAFKESVEIGAGFSGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDGVRSAAIVRRAKKAYEDIKSG HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC KSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCEEEECCCCC DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITV CCCEEEEECCCEEEEEECCCHHCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEH PAAVAAAMKVADPKEAAKLAEKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC DSGSLEIDHVLKKGIEAAEEAGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARM CCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH IAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLTKIDGRKLPLGVAGGPLYGHN HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCC TLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCHHCCCC YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGM CCCEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHEEEHHHHHHHHHHCCCCHHHHH MSFGEMLCAFKESVEIGAGFSGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDGVRSAAIVRRAKKAYEDIKSG HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC KSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCEEEECCCCC DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITV CCCEEEEECCCEEEEEECCCHHCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEH PAAVAAAMKVADPKEAAKLAEKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]