Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227714

Identifier: 21227714

GI number: 21227714

Start: 1922845

End: 1924635

Strand: Direct

Name: 21227714

Synonym: MM_1612

Alternate gene names: NA

Gene position: 1922845-1924635 (Clockwise)

Preceding gene: 21227709

Following gene: 21227715

Centisome position: 46.94

GC content: 49.13

Gene sequence:

>1791_bases
TTGAATAACGAAGTTTATGCTGCAGTAATGGCTTCAATTTCAGGTATCCAGAATCTTACAAATGACAGGATTGAAGCTCT
TACCAAAGGTCATGGAATGACAAACATCGGCGCGATGTGTGCTGCAAATGCTATTGCTACAGAGCTTTTCCGGGGTGCCA
ATATCACGCTTACAGATGAAGACAGCGGCAGCCTGGAAATTGATCATGTACTCAAAAAAGGCATTGAAGCCGCAGAAGAA
GCCGGAGCAAGCCCGGCAAACGCAGCCCTTTTTGCAGCTACAATCTGCTACTTTGCAGGTTCAAATGCCCAGGCCGGAGT
CCCTGCAGGGAACCGGAAAATAGGAGCTCTTGCTCGCATGATCGCAGGAGCCGACAGGACAGGGGTTATAGCCATTCCCA
CTCCAAAGTCAAATAACAAGGTCTCAGGCTTTGCAGCCGTACAGGCTATTTACAGTGCCATGGCAGAAGGCAAACTCACA
AAAATTGACGGGCGGAAACTTCCTCTTGGGGTTGCAGGCGGCCCCCTTTATGGGCACAACACCCTTGGTGAAGACATAGG
ATTTCCGGAAGTATCCATGAACGCTGCAAAGATAGGGACAGAAGCTATGATGCAGGCTTACTGGGGAGCAGGCATTTCCG
CAAGTCCTATTATTTCTGCAGTACTCGGAGCTGCAGCAGCTCTTGAAATCGTGCACCCTGATGCTTTTGTTGGTGAGGAG
TACGGCGGCTTTTTTGATGTGAACAGTGCCTATCTTGCAGGAAAAGCTGCCTGTCAGGCTGCAGGCATTCCGGAAAAACT
CCATATGCGCGGTACAGACGAAGAGTACGATTCTTTCAGGCTCGTAGGAGACCTTGGAGTTATCCTGAAAGATATAGGTG
CTCCCACTGTAGTGGGGATGATGTCTTTTGGCGAGATGCTGTGCGCATTTAAGGAATCGGTTGAAATCGGAGCCGGATTT
TCCGGAGGACCTATAATGCCTCCTCTCGGACATATGACTGCGGACACAATAATTACCCTCAGGTCCCTGATAAAGTTTGA
AGGCGATATTGAGCAGGCTGCAGATGTCATTGCAGAGGTGAAAAAGAATGAATGGCTTGACCCGGAAATTGCCGCGGTTG
CCCTTAATACAATTGCCCGAAAAACCGAACAGGTCAGGAGAGGCCCCATTACGCGTACCATGATACTTGGGACTGACGGG
GTCCGCTCAGCTGCTATCGTCAGAAGGGCAAAAAAGGCATATGAGGATATAAAATCCGGAAAGTCCGTTGAGGATGTCGT
GAAAGAACTCGACCTGGAAAGGAAGAAAACTGTCGAAACAAGGGCTGCTGCGATGCTTGGAGCCATGACAGGACACGAAG
TCAGGATTGAGATTACGAAAATGGTTGGAGGTGCCCGCCGTAGCCATCCCTTTACTACTTCATATTACGGGTTTGATACA
GATGCCGATGTTAAACTGACTGTAGACGGCAGGACTTTTGAACTTCTGGGGCTTGGGCAGAATGTGATCCCTGATGCTAT
TTTCAACGATCGAAAGGAGCTTCTGGAAATTATCCCCCTGGCAGCCATACCGGTCTGTGAACTCCAGCTTTCTGGGCACT
CGATTATTAACATTACGGTGCCTGCAGCCGTTGCAGCTGCGATGAAAGTTGCCGATCCAAAAGAAGCTGCAAAACTTGCG
GAAAAAGGAGGAAAGTCCTGTTCAGCTGCAATTCCGGGAGCCCGGGAAAAAGCAACGGATGTTGCAAAACTGGCTGTCAG
GATAATGAAATCCATGGAATGCATTGAGTAA

Upstream 100 bases:

>100_bases
AATATAGTCACAGTGTTAATGAATAACTATTTACATGACGAATTTTAAACTATTGAGAAAAAATCATCTCGAATTATTTT
TTTAAAGGAGGCAAATTTTT

Downstream 100 bases:

>100_bases
ATCCCGATGAACACACACCAATCCAAAAAATCCACCAAACCACAAAAACGGCCTGAATTCCGGGCAAAGGTAAAAGGGTC
CGACTTACAGGTTTAACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDEDSGSLEIDHVLKKGIEAAEE
AGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARMIAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLT
KIDGRKLPLGVAGGPLYGHNTLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE
YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGMMSFGEMLCAFKESVEIGAGF
SGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEVKKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDG
VRSAAIVRRAKKAYEDIKSGKSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT
DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITVPAAVAAAMKVADPKEAAKLA
EKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE

Sequences:

>Translated_596_residues
MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDEDSGSLEIDHVLKKGIEAAEE
AGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARMIAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLT
KIDGRKLPLGVAGGPLYGHNTLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE
YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGMMSFGEMLCAFKESVEIGAGF
SGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEVKKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDG
VRSAAIVRRAKKAYEDIKSGKSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT
DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITVPAAVAAAMKVADPKEAAKLA
EKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE
>Mature_596_residues
MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDEDSGSLEIDHVLKKGIEAAEE
AGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARMIAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLT
KIDGRKLPLGVAGGPLYGHNTLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE
YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGMMSFGEMLCAFKESVEIGAGF
SGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEVKKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDG
VRSAAIVRRAKKAYEDIKSGKSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT
DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITVPAAVAAAMKVADPKEAAKLA
EKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62525; Mature: 62525

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC
DSGSLEIDHVLKKGIEAAEEAGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARM
CCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
IAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLTKIDGRKLPLGVAGGPLYGHN
HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCC
TLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCHHCCCC
YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGM
CCCEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHEEEHHHHHHHHHHCCCCHHHHH
MSFGEMLCAFKESVEIGAGFSGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEV
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDGVRSAAIVRRAKKAYEDIKSG
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
KSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCEEEECCCCC
DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITV
CCCEEEEECCCEEEEEECCCHHCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEH
PAAVAAAMKVADPKEAAKLAEKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNEVYAAVMASISGIQNLTNDRIEALTKGHGMTNIGAMCAANAIATELFRGANITLTDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC
DSGSLEIDHVLKKGIEAAEEAGASPANAALFAATICYFAGSNAQAGVPAGNRKIGALARM
CCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
IAGADRTGVIAIPTPKSNNKVSGFAAVQAIYSAMAEGKLTKIDGRKLPLGVAGGPLYGHN
HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCC
TLGEDIGFPEVSMNAAKIGTEAMMQAYWGAGISASPIISAVLGAAAALEIVHPDAFVGEE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCHHCCCC
YGGFFDVNSAYLAGKAACQAAGIPEKLHMRGTDEEYDSFRLVGDLGVILKDIGAPTVVGM
CCCEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHEEEHHHHHHHHHHCCCCHHHHH
MSFGEMLCAFKESVEIGAGFSGGPIMPPLGHMTADTIITLRSLIKFEGDIEQAADVIAEV
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KKNEWLDPEIAAVALNTIARKTEQVRRGPITRTMILGTDGVRSAAIVRRAKKAYEDIKSG
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
KSVEDVVKELDLERKKTVETRAAAMLGAMTGHEVRIEITKMVGGARRSHPFTTSYYGFDT
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCEEEECCCCC
DADVKLTVDGRTFELLGLGQNVIPDAIFNDRKELLEIIPLAAIPVCELQLSGHSIINITV
CCCEEEEECCCEEEEEECCCHHCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEH
PAAVAAAMKVADPKEAAKLAEKGGKSCSAAIPGAREKATDVAKLAVRIMKSMECIE
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]