| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mtrH [H]
Identifier: 21227642
GI number: 21227642
Start: 1840042
End: 1840992
Strand: Reverse
Name: mtrH [H]
Synonym: MM_1540
Alternate gene names: 21227642
Gene position: 1840992-1840042 (Counterclockwise)
Preceding gene: 21227643
Following gene: 21227641
Centisome position: 44.94
GC content: 49.21
Gene sequence:
>951_bases ATGTTCAAGTTTGACAAGAAACAGGAAGTTTTCGAACTCGGTGGAGTTAAGTTCGGTGGACAGCCGGGTGAAAACCCAAC CGTGTTAGTCAGTACCATGTTCTATGCAAGGCACAAGATTGTAACTGATGAGGACAAGGGTATCTTCGACAGGGCAGCTG CAGAAACCCTATGGAACACCCAGGTATCACTGAGCGATGCCACAGGGCTCCCCTATGTAAATCAGATTGTAGGAGAAACC CCTGAATCGATCAAACGCTATATTGAGTGGTTCGTTGGGATAGATGATAGAACACCTTTCCTGATAGACTCCTCAGCCGG AAACGTGCGTGCAGCCGCAGCTCAGTACTGTACCGAAATAGGTGTTGCAGACAGGGCAATCCACAACTCGATCAACGCAA GTATTGAACAGTCTGAAATCGATGTCCTCACAGAAAGTGATGTGTCAGCTGCAATCGTTCTTGCATTCAATGCAACTGAC CCGACCGTAAAAGGAAAAATAGATATCCTTGAAGTCGGAGGTTCCGGACAGACCAAAGGTATGCTCCAGGTCGCCAAGGA ATGCGGAATAAAGTATCCCATTATCGACGTTGCAGCCATGCCTCTCGGTGCAGGCTCAGGCGCAACAATCCGCTCGGTAC CCACACTCAAAGGAAAATTCGGGCTGCCAATCGGCGGTGGATACCACAACATGGCTTCTGCATGGGACTGGCTCCGCAAA TTCAAGAAAACTCAGCCTGACCCCAAGGCAATCTACATGCCTACAGACATTGGTACCAACCTGGTAGCCCAGATTGCAGG TTCTGACTATCTGCTTTACGGTCCGATCGAGAACGTCAACCAGATTTTCCCGGCTGTTGCAATGGTCGACATTATGCTCG GTGAAACTGCAAAGGAACTTGGCGTCGAGATCGCAGATCTGGAAAACCACCCTGTTACCAAACTGACATAA
Upstream 100 bases:
>100_bases GGAAGAGATATCGGAATTCTGTACGGCGGAGTAATCGGCCTGCTGCTCTTCCTGATCTATGTCCAGATATCATCAATGTT CATGTAAATGAGGGATCAAA
Downstream 100 bases:
>100_bases GTTCAAAACAGATTACAAGGACTACAGAGTCCGGAAGCAAAGAGAAATTTCTCTTTGTTTTTTCTTTTTTTGCGCCTTAA GTTCATAATCTTACTTTAAA
Product: tetrahydromethanopterin S-methyltransferase subunit H
Products: NA
Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit H [H]
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MFKFDKKQEVFELGGVKFGGQPGENPTVLVSTMFYARHKIVTDEDKGIFDRAAAETLWNTQVSLSDATGLPYVNQIVGET PESIKRYIEWFVGIDDRTPFLIDSSAGNVRAAAAQYCTEIGVADRAIHNSINASIEQSEIDVLTESDVSAAIVLAFNATD PTVKGKIDILEVGGSGQTKGMLQVAKECGIKYPIIDVAAMPLGAGSGATIRSVPTLKGKFGLPIGGGYHNMASAWDWLRK FKKTQPDPKAIYMPTDIGTNLVAQIAGSDYLLYGPIENVNQIFPAVAMVDIMLGETAKELGVEIADLENHPVTKLT
Sequences:
>Translated_316_residues MFKFDKKQEVFELGGVKFGGQPGENPTVLVSTMFYARHKIVTDEDKGIFDRAAAETLWNTQVSLSDATGLPYVNQIVGET PESIKRYIEWFVGIDDRTPFLIDSSAGNVRAAAAQYCTEIGVADRAIHNSINASIEQSEIDVLTESDVSAAIVLAFNATD PTVKGKIDILEVGGSGQTKGMLQVAKECGIKYPIIDVAAMPLGAGSGATIRSVPTLKGKFGLPIGGGYHNMASAWDWLRK FKKTQPDPKAIYMPTDIGTNLVAQIAGSDYLLYGPIENVNQIFPAVAMVDIMLGETAKELGVEIADLENHPVTKLT >Mature_316_residues MFKFDKKQEVFELGGVKFGGQPGENPTVLVSTMFYARHKIVTDEDKGIFDRAAAETLWNTQVSLSDATGLPYVNQIVGET PESIKRYIEWFVGIDDRTPFLIDSSAGNVRAAAAQYCTEIGVADRAIHNSINASIEQSEIDVLTESDVSAAIVLAFNATD PTVKGKIDILEVGGSGQTKGMLQVAKECGIKYPIIDVAAMPLGAGSGATIRSVPTLKGKFGLPIGGGYHNMASAWDWLRK FKKTQPDPKAIYMPTDIGTNLVAQIAGSDYLLYGPIENVNQIFPAVAMVDIMLGETAKELGVEIADLENHPVTKLT
Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl grou
COG id: COG1962
COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit H
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtrH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011005 - InterPro: IPR002856 - ProDom: PD009948 [H]
Pfam domain/function: PF02007 MtrH [H]
EC number: =2.1.1.86 [H]
Molecular weight: Translated: 34044; Mature: 34044
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFDKKQEVFELGGVKFGGQPGENPTVLVSTMFYARHKIVTDEDKGIFDRAAAETLWNT CCCCCCHHHHHHHCCEEECCCCCCCCEEEEEEHHHHHHCEECCCCCCHHHHHHHHHHHCC QVSLSDATGLPYVNQIVGETPESIKRYIEWFVGIDDRTPFLIDSSAGNVRAAAAQYCTEI EEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHH GVADRAIHNSINASIEQSEIDVLTESDVSAAIVLAFNATDPTVKGKIDILEVGGSGQTKG CHHHHHHHHHHCCCEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHH MLQVAKECGIKYPIIDVAAMPLGAGSGATIRSVPTLKGKFGLPIGGGYHNMASAWDWLRK HHHHHHHCCCCCCCHHHEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH FKKTQPDPKAIYMPTDIGTNLVAQIAGSDYLLYGPIENVNQIFPAVAMVDIMLGETAKEL HHCCCCCCCEEEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHH GVEIADLENHPVTKLT CCEEEECCCCCCCCCC >Mature Secondary Structure MFKFDKKQEVFELGGVKFGGQPGENPTVLVSTMFYARHKIVTDEDKGIFDRAAAETLWNT CCCCCCHHHHHHHCCEEECCCCCCCCEEEEEEHHHHHHCEECCCCCCHHHHHHHHHHHCC QVSLSDATGLPYVNQIVGETPESIKRYIEWFVGIDDRTPFLIDSSAGNVRAAAAQYCTEI EEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHH GVADRAIHNSINASIEQSEIDVLTESDVSAAIVLAFNATDPTVKGKIDILEVGGSGQTKG CHHHHHHHHHHCCCEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHH MLQVAKECGIKYPIIDVAAMPLGAGSGATIRSVPTLKGKFGLPIGGGYHNMASAWDWLRK HHHHHHHCCCCCCCHHHEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH FKKTQPDPKAIYMPTDIGTNLVAQIAGSDYLLYGPIENVNQIFPAVAMVDIMLGETAKEL HHCCCCCCCEEEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHH GVEIADLENHPVTKLT CCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]