| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227641
Identifier: 21227641
GI number: 21227641
Start: 1837823
End: 1838953
Strand: Reverse
Name: 21227641
Synonym: MM_1539
Alternate gene names: NA
Gene position: 1838953-1837823 (Counterclockwise)
Preceding gene: 21227642
Following gene: 21227634
Centisome position: 44.89
GC content: 39.08
Gene sequence:
>1131_bases ATGCTGATCAGGAAAAATATATCCCTGGATGATAAATACCTTAAAAAATTACAGCCTTTTCTGGATGCAAACGATGGAAA TCTTAGCGCTGCAGTAAGGGACACGATTGAAATCGCGGATACTGCACTTACAAATCATAGAAGCATTGACGAAGCAATCA GATTTTTGAGAGAAAACCCTGCAAAAGAAGAATTGAGTGATACAATTAAAAGCGGGGAAAATATAATCATAAATAAAACA ATTCTTGAGTGGCTTTTCAGGTACACGAAAGGAAGGCTCACGGATGAAGAACTGGTTAATGAGCTTATCAATCCTTTTGA GATCAGCAATATGAAAGATCTTGAGGATTACCTGAACCGGATCTTCAAAAATAACCAGTGGACAATAAGAACTTCAATTA AGTGCGAAGACATACAGAACCCTGAATCTGCCCTTATACTTCTCTCCAATGCTACCATAAATAGCAGGGAATTTTTCGCC CAGCTTATAGCCGATTTTCTGGCAAGATGGAAACAGCTTGACGTTGATCATATTTTCAGGCGGGCGAATTCGACCCAGAT TTCTTTCAAAAAGAACCTTTCCGTTTCTCTCAATGAAACAATGCCTGGAATTCGAAAGCACTTTGGTTATCTTGACATAA TATGCAAAGAACTTGACGATAATACAGAATTCTGGACGCAGCTGATGCACACATACAATGTTGAGAGATACAATCTTGTG ACCCTGCACAGAAATCAGTTCGAAACCTTTGCGGCTGGAGAAGTCCCTAACCCGACAAAAATTCTGGAACGCCTGTGCAA ACAGTCAGTAAATGAGATGTCTCTTCCAGATTTGCTGGTATACTTCAAGAAGATGTACCTGGCAACCCAGCTGGTAAAGA ATATAGAACTCTGCCTTGAGCCAGGTAAAGAATCAGTAACTATTTTCCATGATTTTAAAAATGAAAAAGTTATCCACAGC CTTGTGGAATATTTTTCGAATATATTCAGAGAAAACGGCACACCTTTTGTAACCTCTTCATATTCGAGTATGATCGTATT CAGGTTCTATGAGGAACATGAACATGAGAACAGCTCCGGAATATATGGAATGGAAGAGTTTACGGAGCCAGATTTTATTT CGGGGGAATAA
Upstream 100 bases:
>100_bases ATCAGTAACTTGAAAAAGTGAAAATGTTATCAATATCAGGGGTACATATCATGGATCATAGCATAGAAAGTCACAAAATC AGAAAATCCTGGGTGAAAAT
Downstream 100 bases:
>100_bases TACTGTCCACAGGATTTCTAAAAATTATCCAGTTAAAAAATAAGAAAAATAAAAAATAAGGCTATTTTCACGCATTTAAC CTTTTGCAACCCCGAGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MLIRKNISLDDKYLKKLQPFLDANDGNLSAAVRDTIEIADTALTNHRSIDEAIRFLRENPAKEELSDTIKSGENIIINKT ILEWLFRYTKGRLTDEELVNELINPFEISNMKDLEDYLNRIFKNNQWTIRTSIKCEDIQNPESALILLSNATINSREFFA QLIADFLARWKQLDVDHIFRRANSTQISFKKNLSVSLNETMPGIRKHFGYLDIICKELDDNTEFWTQLMHTYNVERYNLV TLHRNQFETFAAGEVPNPTKILERLCKQSVNEMSLPDLLVYFKKMYLATQLVKNIELCLEPGKESVTIFHDFKNEKVIHS LVEYFSNIFRENGTPFVTSSYSSMIVFRFYEEHEHENSSGIYGMEEFTEPDFISGE
Sequences:
>Translated_376_residues MLIRKNISLDDKYLKKLQPFLDANDGNLSAAVRDTIEIADTALTNHRSIDEAIRFLRENPAKEELSDTIKSGENIIINKT ILEWLFRYTKGRLTDEELVNELINPFEISNMKDLEDYLNRIFKNNQWTIRTSIKCEDIQNPESALILLSNATINSREFFA QLIADFLARWKQLDVDHIFRRANSTQISFKKNLSVSLNETMPGIRKHFGYLDIICKELDDNTEFWTQLMHTYNVERYNLV TLHRNQFETFAAGEVPNPTKILERLCKQSVNEMSLPDLLVYFKKMYLATQLVKNIELCLEPGKESVTIFHDFKNEKVIHS LVEYFSNIFRENGTPFVTSSYSSMIVFRFYEEHEHENSSGIYGMEEFTEPDFISGE >Mature_376_residues MLIRKNISLDDKYLKKLQPFLDANDGNLSAAVRDTIEIADTALTNHRSIDEAIRFLRENPAKEELSDTIKSGENIIINKT ILEWLFRYTKGRLTDEELVNELINPFEISNMKDLEDYLNRIFKNNQWTIRTSIKCEDIQNPESALILLSNATINSREFFA QLIADFLARWKQLDVDHIFRRANSTQISFKKNLSVSLNETMPGIRKHFGYLDIICKELDDNTEFWTQLMHTYNVERYNLV TLHRNQFETFAAGEVPNPTKILERLCKQSVNEMSLPDLLVYFKKMYLATQLVKNIELCLEPGKESVTIFHDFKNEKVIHS LVEYFSNIFRENGTPFVTSSYSSMIVFRFYEEHEHENSSGIYGMEEFTEPDFISGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43949; Mature: 43949
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRKNISLDDKYLKKLQPFLDANDGNLSAAVRDTIEIADTALTNHRSIDEAIRFLRENP CEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC AKEELSDTIKSGENIIINKTILEWLFRYTKGRLTDEELVNELINPFEISNMKDLEDYLNR CHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH IFKNNQWTIRTSIKCEDIQNPESALILLSNATINSREFFAQLIADFLARWKQLDVDHIFR HHCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH RANSTQISFKKNLSVSLNETMPGIRKHFGYLDIICKELDDNTEFWTQLMHTYNVERYNLV HCCCCEEEEECCCCEEEHHCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE TLHRNQFETFAAGEVPNPTKILERLCKQSVNEMSLPDLLVYFKKMYLATQLVKNIELCLE EEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC PGKESVTIFHDFKNEKVIHSLVEYFSNIFRENGTPFVTSSYSSMIVFRFYEEHEHENSSG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHEEEHHHHCCCCCCC IYGMEEFTEPDFISGE CCCHHHCCCCCCCCCC >Mature Secondary Structure MLIRKNISLDDKYLKKLQPFLDANDGNLSAAVRDTIEIADTALTNHRSIDEAIRFLRENP CEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC AKEELSDTIKSGENIIINKTILEWLFRYTKGRLTDEELVNELINPFEISNMKDLEDYLNR CHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH IFKNNQWTIRTSIKCEDIQNPESALILLSNATINSREFFAQLIADFLARWKQLDVDHIFR HHCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH RANSTQISFKKNLSVSLNETMPGIRKHFGYLDIICKELDDNTEFWTQLMHTYNVERYNLV HCCCCEEEEECCCCEEEHHCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE TLHRNQFETFAAGEVPNPTKILERLCKQSVNEMSLPDLLVYFKKMYLATQLVKNIELCLE EEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC PGKESVTIFHDFKNEKVIHSLVEYFSNIFRENGTPFVTSSYSSMIVFRFYEEHEHENSSG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHEEEHHHHCCCCCCC IYGMEEFTEPDFISGE CCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA