| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227611
Identifier: 21227611
GI number: 21227611
Start: 1798202
End: 1799182
Strand: Reverse
Name: 21227611
Synonym: MM_1509
Alternate gene names: NA
Gene position: 1799182-1798202 (Counterclockwise)
Preceding gene: 21227612
Following gene: 21227610
Centisome position: 43.92
GC content: 40.16
Gene sequence:
>981_bases GTGGAGGGTAAAAAATACAGGACGCTCGGTCAGGATTGCGGGGCGGTTTCAGAGGTAATGGGGGCAGTGCTCATGATATC TATTGTCGTGCTAGCTTTTTCTTCAGTCGCTCTTACAATATTTTCAGAAGGAGATTCGATGGACCCGCCGCATACTCCTC ATACCAACCTGCGCGAAAACATTAACACTTCAGAAGATACTGTGGAAATCTTCCATAATGGGGGGGAAGAAATTGACCTT AAAGATATCATGATAATACTCAACACTGGAGAGAAACGGGCAGAGTTCAACATGTCTGAATCTGCTGTTAAAGTTTTTGA TCCCAAAGGCAATCAGCTACCCTCTGACGGCGTTTTTGCATTAGGAAACCGCATCGTAATTGATCCCACAGGTAAAATCA ATATTACAAGCGGAAATGCAGTTGATCTCTATTTTGTGCACACAGCGTCCGATCAGGTAATTCAAAAAACAAAATTATGG AAAGATGTCAGGGATTTGCCTTACTGGATAACTCCTCATACATTTCCTGCCGGAACAGCATATGATAATTCCACGGAGAA ATGGCTGGACACAGAATTAGTCGATAAAATCGATAATAGGCCAACGGAAAGTTTTATACCAAAAAATATCGCGATATGCC AAAATTATACTTTCGGGATAGATGTAGAGGAACTGGGCATTCCAGAAAGTACATCATTTACTAAAGTTATCCTGAAAATA ATCTCTACAAGACACGATCAAAGTCCGCAAATAAGGATGGTACCAGAAATCTATAACGGGTCAGAATGGACAACTTTTAA TCCCATTCCCTTTGAAGGTTCAAATAAATATGTGGAAACAAACCTCACCATAACCAAATATGTGAAAAACATTACAGAAT TAGAGAATCTTGAAGTCAGGATATTAGCTGAAGGGAATGCGGCCAATCAAAGTAAAAAAACTTTCTGGGTTGATTTTGTG GGCGTCCATGTGGAGTATTAA
Upstream 100 bases:
>100_bases AGACGTGATATTTAGTGTTAATATCAGCTCGACAGGTTAATATACAATAATCAATAATTTAGAAAGTCAGGACGCAATAT TATAGAAGGTGGCATTTATC
Downstream 100 bases:
>100_bases CCATGAAGAAGGGCATCCAGATCAGGGGTTTGAAGAGTATGACAGAGAAGAGTTCAAAAAATTCACAGGCAAAAAAGCCC TTTTTTCTCCGTTCGGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MEGKKYRTLGQDCGAVSEVMGAVLMISIVVLAFSSVALTIFSEGDSMDPPHTPHTNLRENINTSEDTVEIFHNGGEEIDL KDIMIILNTGEKRAEFNMSESAVKVFDPKGNQLPSDGVFALGNRIVIDPTGKINITSGNAVDLYFVHTASDQVIQKTKLW KDVRDLPYWITPHTFPAGTAYDNSTEKWLDTELVDKIDNRPTESFIPKNIAICQNYTFGIDVEELGIPESTSFTKVILKI ISTRHDQSPQIRMVPEIYNGSEWTTFNPIPFEGSNKYVETNLTITKYVKNITELENLEVRILAEGNAANQSKKTFWVDFV GVHVEY
Sequences:
>Translated_326_residues MEGKKYRTLGQDCGAVSEVMGAVLMISIVVLAFSSVALTIFSEGDSMDPPHTPHTNLRENINTSEDTVEIFHNGGEEIDL KDIMIILNTGEKRAEFNMSESAVKVFDPKGNQLPSDGVFALGNRIVIDPTGKINITSGNAVDLYFVHTASDQVIQKTKLW KDVRDLPYWITPHTFPAGTAYDNSTEKWLDTELVDKIDNRPTESFIPKNIAICQNYTFGIDVEELGIPESTSFTKVILKI ISTRHDQSPQIRMVPEIYNGSEWTTFNPIPFEGSNKYVETNLTITKYVKNITELENLEVRILAEGNAANQSKKTFWVDFV GVHVEY >Mature_326_residues MEGKKYRTLGQDCGAVSEVMGAVLMISIVVLAFSSVALTIFSEGDSMDPPHTPHTNLRENINTSEDTVEIFHNGGEEIDL KDIMIILNTGEKRAEFNMSESAVKVFDPKGNQLPSDGVFALGNRIVIDPTGKINITSGNAVDLYFVHTASDQVIQKTKLW KDVRDLPYWITPHTFPAGTAYDNSTEKWLDTELVDKIDNRPTESFIPKNIAICQNYTFGIDVEELGIPESTSFTKVILKI ISTRHDQSPQIRMVPEIYNGSEWTTFNPIPFEGSNKYVETNLTITKYVKNITELENLEVRILAEGNAANQSKKTFWVDFV GVHVEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36530; Mature: 36530
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGKKYRTLGQDCGAVSEVMGAVLMISIVVLAFSSVALTIFSEGDSMDPPHTPHTNLREN CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCHHHC INTSEDTVEIFHNGGEEIDLKDIMIILNTGEKRAEFNMSESAVKVFDPKGNQLPSDGVFA CCCCHHHHHHHHCCCCEEEHEEEEEEEECCCCHHCCCCCCCEEEEECCCCCCCCCCCEEE LGNRIVIDPTGKINITSGNAVDLYFVHTASDQVIQKTKLWKDVRDLPYWITPHTFPAGTA CCCEEEECCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCC YDNSTEKWLDTELVDKIDNRPTESFIPKNIAICQNYTFGIDVEELGIPESTSFTKVILKI CCCCCHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCEECCCHHHCCCCCCCHHHHHHHHH ISTRHDQSPQIRMVPEIYNGSEWTTFNPIPFEGSNKYVETNLTITKYVKNITELENLEVR HHCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCEEE ILAEGNAANQSKKTFWVDFVGVHVEY EEECCCCCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MEGKKYRTLGQDCGAVSEVMGAVLMISIVVLAFSSVALTIFSEGDSMDPPHTPHTNLREN CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCHHHC INTSEDTVEIFHNGGEEIDLKDIMIILNTGEKRAEFNMSESAVKVFDPKGNQLPSDGVFA CCCCHHHHHHHHCCCCEEEHEEEEEEEECCCCHHCCCCCCCEEEEECCCCCCCCCCCEEE LGNRIVIDPTGKINITSGNAVDLYFVHTASDQVIQKTKLWKDVRDLPYWITPHTFPAGTA CCCEEEECCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCC YDNSTEKWLDTELVDKIDNRPTESFIPKNIAICQNYTFGIDVEELGIPESTSFTKVILKI CCCCCHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCEECCCHHHCCCCCCCHHHHHHHHH ISTRHDQSPQIRMVPEIYNGSEWTTFNPIPFEGSNKYVETNLTITKYVKNITELENLEVR HHCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCEEE ILAEGNAANQSKKTFWVDFVGVHVEY EEECCCCCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA