| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227610
Identifier: 21227610
GI number: 21227610
Start: 1797237
End: 1798163
Strand: Reverse
Name: 21227610
Synonym: MM_1508
Alternate gene names: NA
Gene position: 1798163-1797237 (Counterclockwise)
Preceding gene: 21227611
Following gene: 21227609
Centisome position: 43.9
GC content: 42.61
Gene sequence:
>927_bases ATGACAGAGAAGAGTTCAAAAAATTCACAGGCAAAAAAGCCCTTTTTTCTCCGTTCGGACTCTGCATCATCAACGGTTGT AGGGGCAGTTTTGCTGCTGGCGATCATTGTTAGCGTATTTTCGGTGGTCAGGATTGGTTATATCCCCGAATGGAAAAACG ATGCGGAATATTCTCATATGAATGATGTCTGGAAGGACATGGCAGACCTCAAATCCAAAATCGACTTAATAACCATAGCC CTGGCATCAGATCCGGATTCTCAAAATACTGAGATTACTATGAGCGTACCATTTCATATGGGAGGAGGGGACGTTCCGCT TATTGGAACCATAAAGTCAAGTGGAACTCTTTCGGTAAATAAAAACGAATGTAACATAACCATAAGTCAAGGTTCCAATG GGAACTTGATAGACCCAGTTGCATGCGGCTCTGTGAGCTACACATCACAAAACAGGTATTATGTGAATCAGGATTTCATA TACGAAGGAGGAGCCCTGATCCTTTCCCAGGGAGAAAGATCTTCTATGATGCTTTACCCTTCGATCCGTTTCTCCAGAAC ACCGGCAAATGAATACAATGTTTCGATACACATTGTAGAGATCGATAAAAACCCGTATGCTCCTGCCGATGTCATATCTT CTAACACAGGATGCTCTCTCCGACTCTCAGGCAAAGAGTATGAGCCTCTCTATAATGACAATAATATAAGTTCGTTCACC TTAACGGTTAATACTGACCATCCCGATGCCTGGTACCTGTATCTTCAGGAAACAACAAAAGAAGCAGGGATAACTGATTC TACAACACTTACACAAAACGAAAACAGCGTGAGTTTAACCTTCCCCTCCGGACCAGGTGGAAAGGGTTTGAACAGGCTCT ATGTTAGTAAGACAATAGTAAAGGTAGAACCTGGAATAGGGATCTAA
Upstream 100 bases:
>100_bases CGGCCAATCAAAGTAAAAAAACTTTCTGGGTTGATTTTGTGGGCGTCCATGTGGAGTATTAACCATGAAGAAGGGCATCC AGATCAGGGGTTTGAAGAGT
Downstream 100 bases:
>100_bases GCTGAGAACATGAACCAGGGAACGAAGGGAAACGAAATGTCTCGAAAAAGCCTATTAAAATCCGAATCCGCAGCTGCAAT TGCAATTGCGGCGGTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHMNDVWKDMADLKSKIDLITIA LASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVNKNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFI YEGGALILSQGERSSMMLYPSIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIVKVEPGIGI
Sequences:
>Translated_308_residues MTEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHMNDVWKDMADLKSKIDLITIA LASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVNKNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFI YEGGALILSQGERSSMMLYPSIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIVKVEPGIGI >Mature_307_residues TEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHMNDVWKDMADLKSKIDLITIAL ASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVNKNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFIY EGGALILSQGERSSMMLYPSIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFTL TVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIVKVEPGIGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33555; Mature: 33424
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHM CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH NDVWKDMADLKSKIDLITIALASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVN HHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEE KNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFIYEGGALILSQGERSSMMLYP CCEEEEEEEECCCCCEECCEECCCEEECCCCCEEECCCEEEECCEEEEECCCCCCEEEEE SIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT CEEEECCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEE LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIV EEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEEEEE KVEPGIGI EECCCCCC >Mature Secondary Structure TEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHM CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH NDVWKDMADLKSKIDLITIALASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVN HHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEE KNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFIYEGGALILSQGERSSMMLYP CCEEEEEEEECCCCCEECCEECCCEEECCCCCEEECCCEEEECCEEEEECCCCCCEEEEE SIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT CEEEECCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEE LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIV EEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEEEEE KVEPGIGI EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA