Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227610

Identifier: 21227610

GI number: 21227610

Start: 1797237

End: 1798163

Strand: Reverse

Name: 21227610

Synonym: MM_1508

Alternate gene names: NA

Gene position: 1798163-1797237 (Counterclockwise)

Preceding gene: 21227611

Following gene: 21227609

Centisome position: 43.9

GC content: 42.61

Gene sequence:

>927_bases
ATGACAGAGAAGAGTTCAAAAAATTCACAGGCAAAAAAGCCCTTTTTTCTCCGTTCGGACTCTGCATCATCAACGGTTGT
AGGGGCAGTTTTGCTGCTGGCGATCATTGTTAGCGTATTTTCGGTGGTCAGGATTGGTTATATCCCCGAATGGAAAAACG
ATGCGGAATATTCTCATATGAATGATGTCTGGAAGGACATGGCAGACCTCAAATCCAAAATCGACTTAATAACCATAGCC
CTGGCATCAGATCCGGATTCTCAAAATACTGAGATTACTATGAGCGTACCATTTCATATGGGAGGAGGGGACGTTCCGCT
TATTGGAACCATAAAGTCAAGTGGAACTCTTTCGGTAAATAAAAACGAATGTAACATAACCATAAGTCAAGGTTCCAATG
GGAACTTGATAGACCCAGTTGCATGCGGCTCTGTGAGCTACACATCACAAAACAGGTATTATGTGAATCAGGATTTCATA
TACGAAGGAGGAGCCCTGATCCTTTCCCAGGGAGAAAGATCTTCTATGATGCTTTACCCTTCGATCCGTTTCTCCAGAAC
ACCGGCAAATGAATACAATGTTTCGATACACATTGTAGAGATCGATAAAAACCCGTATGCTCCTGCCGATGTCATATCTT
CTAACACAGGATGCTCTCTCCGACTCTCAGGCAAAGAGTATGAGCCTCTCTATAATGACAATAATATAAGTTCGTTCACC
TTAACGGTTAATACTGACCATCCCGATGCCTGGTACCTGTATCTTCAGGAAACAACAAAAGAAGCAGGGATAACTGATTC
TACAACACTTACACAAAACGAAAACAGCGTGAGTTTAACCTTCCCCTCCGGACCAGGTGGAAAGGGTTTGAACAGGCTCT
ATGTTAGTAAGACAATAGTAAAGGTAGAACCTGGAATAGGGATCTAA

Upstream 100 bases:

>100_bases
CGGCCAATCAAAGTAAAAAAACTTTCTGGGTTGATTTTGTGGGCGTCCATGTGGAGTATTAACCATGAAGAAGGGCATCC
AGATCAGGGGTTTGAAGAGT

Downstream 100 bases:

>100_bases
GCTGAGAACATGAACCAGGGAACGAAGGGAAACGAAATGTCTCGAAAAAGCCTATTAAAATCCGAATCCGCAGCTGCAAT
TGCAATTGCGGCGGTGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHMNDVWKDMADLKSKIDLITIA
LASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVNKNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFI
YEGGALILSQGERSSMMLYPSIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT
LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIVKVEPGIGI

Sequences:

>Translated_308_residues
MTEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHMNDVWKDMADLKSKIDLITIA
LASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVNKNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFI
YEGGALILSQGERSSMMLYPSIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT
LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIVKVEPGIGI
>Mature_307_residues
TEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHMNDVWKDMADLKSKIDLITIAL
ASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVNKNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFIY
EGGALILSQGERSSMMLYPSIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFTL
TVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIVKVEPGIGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33555; Mature: 33424

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHM
CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
NDVWKDMADLKSKIDLITIALASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVN
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEE
KNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFIYEGGALILSQGERSSMMLYP
CCEEEEEEEECCCCCEECCEECCCEEECCCCCEEECCCEEEECCEEEEECCCCCCEEEEE
SIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT
CEEEECCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEE
LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIV
EEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEEEEE
KVEPGIGI
EECCCCCC
>Mature Secondary Structure 
TEKSSKNSQAKKPFFLRSDSASSTVVGAVLLLAIIVSVFSVVRIGYIPEWKNDAEYSHM
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
NDVWKDMADLKSKIDLITIALASDPDSQNTEITMSVPFHMGGGDVPLIGTIKSSGTLSVN
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEE
KNECNITISQGSNGNLIDPVACGSVSYTSQNRYYVNQDFIYEGGALILSQGERSSMMLYP
CCEEEEEEEECCCCCEECCEECCCEEECCCCCEEECCCEEEECCEEEEECCCCCCEEEEE
SIRFSRTPANEYNVSIHIVEIDKNPYAPADVISSNTGCSLRLSGKEYEPLYNDNNISSFT
CEEEECCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEE
LTVNTDHPDAWYLYLQETTKEAGITDSTTLTQNENSVSLTFPSGPGGKGLNRLYVSKTIV
EEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEEEEE
KVEPGIGI
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA