| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hisB [H]
Identifier: 21227607
GI number: 21227607
Start: 1794322
End: 1794897
Strand: Direct
Name: hisB [H]
Synonym: MM_1505
Alternate gene names: 21227607
Gene position: 1794322-1794897 (Clockwise)
Preceding gene: 21227606
Following gene: 21227613
Centisome position: 43.8
GC content: 48.96
Gene sequence:
>576_bases ATGAGAATTAGCAAAATTTCCCGCAAGACGAAGGAAACCGACATTCAGCTCGAAATTAACCTTGACGGTAAAGGCACTGC AGATGTCAGTACAGGGATCGGGTTTTTTGACCACATGCTTTCTTCTTTCGCAAGGCACGCCGAGTTTGACCTTAAAGTGC GTGCCGAAGGTGATCTTTATGTGGACGAGCACCACCTCATTGAGGATACGGGAATAGTCCTCGGAAAAGCTCTTGCCGAA GCCCTTGGAGATATGGCAGGAATCGCCCGTTTCGGGGAAGCCAGAATCCCTATGGACGAGGCTCTTGCTGAAGTTGCCCT GGATGTAGGAGGCCGCAGCTATCTTGTCATGAAAGCTGACTTTATCGCTCCCCAGGTAGGGCAGTTCAGTACCCAGCTGG TAAAGCACTTCTTTGAGACTGTCGCCTCAAATGCAAAGATTACCATACACGCCAGCGTTTACGGGGACAATGACCACCAT AAAATAGAGGCTCTCTTCAAGGCTTTTGCTTATGCGATGAAAAGGGCTGTAAAAATCGAGGGCAAAGAAGTAAAGAGCAC GAAAGGCACCCTCTAA
Upstream 100 bases:
>100_bases TGTAGGCAGTGCCCTTTATATGGGCAGGTTTACTCTGGAAGAAGCAATTAATGCTGCCCTTGGAGATATTTAATTATTTT AAAGAAAAGTGTGATGCTGT
Downstream 100 bases:
>100_bases TTATTTTTAAACTCAGGTGTTTTTAAATTCCGGTTTTCTTTCCCATTAGCGGGAACTGCACGCTTAAATCCTGACTCGCC ACTCATTCGTAAAGACGAGC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRISKISRKTKETDIQLEINLDGKGTADVSTGIGFFDHMLSSFARHAEFDLKVRAEGDLYVDEHHLIEDTGIVLGKALAE ALGDMAGIARFGEARIPMDEALAEVALDVGGRSYLVMKADFIAPQVGQFSTQLVKHFFETVASNAKITIHASVYGDNDHH KIEALFKAFAYAMKRAVKIEGKEVKSTKGTL
Sequences:
>Translated_191_residues MRISKISRKTKETDIQLEINLDGKGTADVSTGIGFFDHMLSSFARHAEFDLKVRAEGDLYVDEHHLIEDTGIVLGKALAE ALGDMAGIARFGEARIPMDEALAEVALDVGGRSYLVMKADFIAPQVGQFSTQLVKHFFETVASNAKITIHASVYGDNDHH KIEALFKAFAYAMKRAVKIEGKEVKSTKGTL >Mature_191_residues MRISKISRKTKETDIQLEINLDGKGTADVSTGIGFFDHMLSSFARHAEFDLKVRAEGDLYVDEHHLIEDTGIVLGKALAE ALGDMAGIARFGEARIPMDEALAEVALDVGGRSYLVMKADFIAPQVGQFSTQLVKHFFETVASNAKITIHASVYGDNDHH KIEALFKAFAYAMKRAVKIEGKEVKSTKGTL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=190, Percent_Identity=46.3157894736842, Blast_Score=199, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6324776, Length=212, Percent_Identity=38.6792452830189, Blast_Score=153, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 20942; Mature: 20942
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISKISRKTKETDIQLEINLDGKGTADVSTGIGFFDHMLSSFARHAEFDLKVRAEGDLY CCCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE VDEHHLIEDTGIVLGKALAEALGDMAGIARFGEARIPMDEALAEVALDVGGRSYLVMKAD ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEC FIAPQVGQFSTQLVKHFFETVASNAKITIHASVYGDNDHHKIEALFKAFAYAMKRAVKIE CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC GKEVKSTKGTL CCCCCCCCCCC >Mature Secondary Structure MRISKISRKTKETDIQLEINLDGKGTADVSTGIGFFDHMLSSFARHAEFDLKVRAEGDLY CCCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE VDEHHLIEDTGIVLGKALAEALGDMAGIARFGEARIPMDEALAEVALDVGGRSYLVMKAD ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEC FIAPQVGQFSTQLVKHFFETVASNAKITIHASVYGDNDHHKIEALFKAFAYAMKRAVKIE CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC GKEVKSTKGTL CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA