Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227579

Identifier: 21227579

GI number: 21227579

Start: 1759990

End: 1761111

Strand: Reverse

Name: 21227579

Synonym: MM_1477

Alternate gene names: NA

Gene position: 1761111-1759990 (Counterclockwise)

Preceding gene: 21227583

Following gene: 21227578

Centisome position: 42.99

GC content: 48.93

Gene sequence:

>1122_bases
ATGCGTATAATTGCGACTGACGTAGGGACAGGTACGCAGGACATCCTGCTCTTTGATTCTGGAAAAGAGGTAGAAAACAG
CCTTATAATGGTAATGCCTGCTCCCACACAGGTGGTTGCGGAAAGAATTCATAGAGTAACGAAAGCAGGAAAGGCGCTTG
TGCTTACCGGAACCATAATGGGAGGGGGACCTTCGGCATGGGCGGTCCGCAAACACCTGAAAGCAGGGCTTCCCGCATAT
GCTACCGAAGCGGCTGCTCTGACCATCCACGATAATCTTGAGAGGGTGAAAGCTTTCGGAGTCCAGATTGTTACGGAAGA
AGAGGCAAAAAGACTTGCAGATTCGGGAGAGGCTCTGAAAATTGTAATGCAGGACTTTGACCTGTATGCGGTTTCATGTG
CACTTTCGAATTTTGAGGTCAGGATGCCGGAAAACTATGCTGTGGCAGTGCAGGACCACGGGAACGCTCCGGATAAGAGC
AACAGGGTCTACAGATTTGAACTTTTAAGGGAACTCATCGAGAAGGGGGGAAAGCTAGAAGACTTTGTTTATAGGCCCGA
AGAAATACCGCAGGCATTCACCCGCATGAAAGCCCAGGCAGATTCGCTTCTTAAAGCAACCGCAGACATTAATACGCGGG
CAGTTTTTATGGACACAGGACCAGCAGCGGTATTTGGGGCCCTTACCGATCCGGCAGCAGTCCAGCCTTCTATTGTGGTA
AATATAGGGAACGGGCATACTCTGGGGGCACTTGTGGATGAGAACAGGATCACGGCTGTTTTCGAGCACCACAGTTCCAG
AATGGACCCGGAAAAGCTTCAGGACTACATTATCAGGCTTGCTGACGGGAAACTTGGTTTTGATGAAGTTTTTGAGGACG
GAGGGCACGGTGCATATATAAAGGAAGTCCCCGGGTTTGGACAGGTTCGCTCGATAATGGTTACAGGTCCCAAAAGGGGG
ATGCTTGAAAAGCTTTCATCCCCGGAAATAAGGCAAGAAATCTCAAAGAAACTGCACTTTGCCGCACCTTTCGGAAGTAT
GATGCTTTCAGGCTGTTTTGGGCTTCTTGCGGGATTCCTTGAGAAATACCCGGAAACATCAATAAAACTTATAAACCACT
AA

Upstream 100 bases:

>100_bases
AATTCTTACATTTTAATGCTTACTTTTCCTCTGTATATTCTGACCAGTAAAATTACTTGCCTGCCCATATTTTAATAATC
TATCAGTCCAATCCCCGGTT

Downstream 100 bases:

>100_bases
GTAGTAGGGAGTAAGTCACCTAAGCCCGGGATATATAAAATTTAAGGGATTGTAAAATTTCAGGTATGAAATTCCCTATC
GGAGAACCGGGCGATGCAGA

Product: pyruvate formate-lyase activating protein

Products: NA

Alternate protein names: Pyruvate Formate-Lyase Activating; Actin-Like ATPase; Pyruvate Format-Lyase Activating

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIMGGGPSAWAVRKHLKAGLPAY
ATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALKIVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKS
NRVYRFELLRELIEKGGKLEDFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV
NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYIKEVPGFGQVRSIMVTGPKRG
MLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFLEKYPETSIKLINH

Sequences:

>Translated_373_residues
MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIMGGGPSAWAVRKHLKAGLPAY
ATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALKIVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKS
NRVYRFELLRELIEKGGKLEDFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV
NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYIKEVPGFGQVRSIMVTGPKRG
MLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFLEKYPETSIKLINH
>Mature_373_residues
MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIMGGGPSAWAVRKHLKAGLPAY
ATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALKIVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKS
NRVYRFELLRELIEKGGKLEDFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV
NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYIKEVPGFGQVRSIMVTGPKRG
MLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFLEKYPETSIKLINH

Specific function: Unknown

COG id: COG4012

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40684; Mature: 40684

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIM
CEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEE
GGGPSAWAVRKHLKAGLPAYATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALK
CCCCHHHHHHHHHHCCCCCHHCCCEEEEEHHHHHHHHHHCEEEEEHHHHHHHHCCCHHEE
IVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKSNRVYRFELLRELIEKGGKLE
HHHHHCCCEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH
DFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEECCCCCCCCCCEEEE
NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYI
ECCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEE
KEVPGFGQVRSIMVTGPKRGMLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFL
ECCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
EKYPETSIKLINH
HHCCCCCEEEECC
>Mature Secondary Structure
MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIM
CEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEE
GGGPSAWAVRKHLKAGLPAYATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALK
CCCCHHHHHHHHHHCCCCCHHCCCEEEEEHHHHHHHHHHCEEEEEHHHHHHHHCCCHHEE
IVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKSNRVYRFELLRELIEKGGKLE
HHHHHCCCEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH
DFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEECCCCCCCCCCEEEE
NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYI
ECCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEE
KEVPGFGQVRSIMVTGPKRGMLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFL
ECCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
EKYPETSIKLINH
HHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA