| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227579
Identifier: 21227579
GI number: 21227579
Start: 1759990
End: 1761111
Strand: Reverse
Name: 21227579
Synonym: MM_1477
Alternate gene names: NA
Gene position: 1761111-1759990 (Counterclockwise)
Preceding gene: 21227583
Following gene: 21227578
Centisome position: 42.99
GC content: 48.93
Gene sequence:
>1122_bases ATGCGTATAATTGCGACTGACGTAGGGACAGGTACGCAGGACATCCTGCTCTTTGATTCTGGAAAAGAGGTAGAAAACAG CCTTATAATGGTAATGCCTGCTCCCACACAGGTGGTTGCGGAAAGAATTCATAGAGTAACGAAAGCAGGAAAGGCGCTTG TGCTTACCGGAACCATAATGGGAGGGGGACCTTCGGCATGGGCGGTCCGCAAACACCTGAAAGCAGGGCTTCCCGCATAT GCTACCGAAGCGGCTGCTCTGACCATCCACGATAATCTTGAGAGGGTGAAAGCTTTCGGAGTCCAGATTGTTACGGAAGA AGAGGCAAAAAGACTTGCAGATTCGGGAGAGGCTCTGAAAATTGTAATGCAGGACTTTGACCTGTATGCGGTTTCATGTG CACTTTCGAATTTTGAGGTCAGGATGCCGGAAAACTATGCTGTGGCAGTGCAGGACCACGGGAACGCTCCGGATAAGAGC AACAGGGTCTACAGATTTGAACTTTTAAGGGAACTCATCGAGAAGGGGGGAAAGCTAGAAGACTTTGTTTATAGGCCCGA AGAAATACCGCAGGCATTCACCCGCATGAAAGCCCAGGCAGATTCGCTTCTTAAAGCAACCGCAGACATTAATACGCGGG CAGTTTTTATGGACACAGGACCAGCAGCGGTATTTGGGGCCCTTACCGATCCGGCAGCAGTCCAGCCTTCTATTGTGGTA AATATAGGGAACGGGCATACTCTGGGGGCACTTGTGGATGAGAACAGGATCACGGCTGTTTTCGAGCACCACAGTTCCAG AATGGACCCGGAAAAGCTTCAGGACTACATTATCAGGCTTGCTGACGGGAAACTTGGTTTTGATGAAGTTTTTGAGGACG GAGGGCACGGTGCATATATAAAGGAAGTCCCCGGGTTTGGACAGGTTCGCTCGATAATGGTTACAGGTCCCAAAAGGGGG ATGCTTGAAAAGCTTTCATCCCCGGAAATAAGGCAAGAAATCTCAAAGAAACTGCACTTTGCCGCACCTTTCGGAAGTAT GATGCTTTCAGGCTGTTTTGGGCTTCTTGCGGGATTCCTTGAGAAATACCCGGAAACATCAATAAAACTTATAAACCACT AA
Upstream 100 bases:
>100_bases AATTCTTACATTTTAATGCTTACTTTTCCTCTGTATATTCTGACCAGTAAAATTACTTGCCTGCCCATATTTTAATAATC TATCAGTCCAATCCCCGGTT
Downstream 100 bases:
>100_bases GTAGTAGGGAGTAAGTCACCTAAGCCCGGGATATATAAAATTTAAGGGATTGTAAAATTTCAGGTATGAAATTCCCTATC GGAGAACCGGGCGATGCAGA
Product: pyruvate formate-lyase activating protein
Products: NA
Alternate protein names: Pyruvate Formate-Lyase Activating; Actin-Like ATPase; Pyruvate Format-Lyase Activating
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIMGGGPSAWAVRKHLKAGLPAY ATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALKIVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKS NRVYRFELLRELIEKGGKLEDFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYIKEVPGFGQVRSIMVTGPKRG MLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFLEKYPETSIKLINH
Sequences:
>Translated_373_residues MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIMGGGPSAWAVRKHLKAGLPAY ATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALKIVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKS NRVYRFELLRELIEKGGKLEDFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYIKEVPGFGQVRSIMVTGPKRG MLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFLEKYPETSIKLINH >Mature_373_residues MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIMGGGPSAWAVRKHLKAGLPAY ATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALKIVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKS NRVYRFELLRELIEKGGKLEDFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYIKEVPGFGQVRSIMVTGPKRG MLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFLEKYPETSIKLINH
Specific function: Unknown
COG id: COG4012
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40684; Mature: 40684
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIM CEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEE GGGPSAWAVRKHLKAGLPAYATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALK CCCCHHHHHHHHHHCCCCCHHCCCEEEEEHHHHHHHHHHCEEEEEHHHHHHHHCCCHHEE IVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKSNRVYRFELLRELIEKGGKLE HHHHHCCCEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH DFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEECCCCCCCCCCEEEE NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYI ECCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEE KEVPGFGQVRSIMVTGPKRGMLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFL ECCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH EKYPETSIKLINH HHCCCCCEEEECC >Mature Secondary Structure MRIIATDVGTGTQDILLFDSGKEVENSLIMVMPAPTQVVAERIHRVTKAGKALVLTGTIM CEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEE GGGPSAWAVRKHLKAGLPAYATEAAALTIHDNLERVKAFGVQIVTEEEAKRLADSGEALK CCCCHHHHHHHHHHCCCCCHHCCCEEEEEHHHHHHHHHHCEEEEEHHHHHHHHCCCHHEE IVMQDFDLYAVSCALSNFEVRMPENYAVAVQDHGNAPDKSNRVYRFELLRELIEKGGKLE HHHHHCCCEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH DFVYRPEEIPQAFTRMKAQADSLLKATADINTRAVFMDTGPAAVFGALTDPAAVQPSIVV HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEEECCCCCCCCCCEEEE NIGNGHTLGALVDENRITAVFEHHSSRMDPEKLQDYIIRLADGKLGFDEVFEDGGHGAYI ECCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEE KEVPGFGQVRSIMVTGPKRGMLEKLSSPEIRQEISKKLHFAAPFGSMMLSGCFGLLAGFL ECCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH EKYPETSIKLINH HHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA