| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227575
Identifier: 21227575
GI number: 21227575
Start: 1756311
End: 1756763
Strand: Direct
Name: 21227575
Synonym: MM_1473
Alternate gene names: NA
Gene position: 1756311-1756763 (Clockwise)
Preceding gene: 21227574
Following gene: 21227580
Centisome position: 42.88
GC content: 42.6
Gene sequence:
>453_bases TTGATAAGGAATTCCTGGCGAGGGTCTAAAATGAGAATACTTGCCCATTTAAGAGAGCTTGATGAATCCCAGAAAGACTG GCAAAGATATCAGAATATATCGCTGGAAGACCTGAAGAAAGACAGAGATAAAAGGAATATGGTTCTTCACGCCATGCTGG TCAGTATCCAGGCTGCTATAGATATAGCTACCAGTTTGATAGCTAAAGAGGGGCTGGGAAAGCCTGCAACATACAGAGAG ACTTTCGAAATATTAGGGCAGGCAGGACTTATCTCAGAGGAACTCGCTGAAGAGCTCTCGGACCTGGCCGGGTTCAGAAA TGTCCTTGTCCACATATACTGGCAGCTAGACTTTGATCAGGTATATGGAATCCTGCAAAATGATCTTAAGACTCTTAAAT CCTTTTTACAGGAAGTTAAGGGACTATTAGCTCAGGATTTATCTACTGAATGA
Upstream 100 bases:
>100_bases AAAGGACGTGTTATCTTCTCCAGAGACGAATCCAGCAGGATAGATTACGAATCTGAGGTTATCTCGACTTATCTGGACCT GAAGTATATGTATGATTTGA
Downstream 100 bases:
>100_bases ATTTTAAGCTGAAGCGCATCAAAATGCAAAGAAAACTTTCATAAATAAAAGTTCATACAGCAGACAACCTTCAGATTATT TCTCGCAAATCTTTTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAIDIATSLIAKEGLGKPATYRE TFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQVYGILQNDLKTLKSFLQEVKGLLAQDLSTE
Sequences:
>Translated_150_residues MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAIDIATSLIAKEGLGKPATYRE TFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQVYGILQNDLKTLKSFLQEVKGLLAQDLSTE >Mature_150_residues MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAIDIATSLIAKEGLGKPATYRE TFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQVYGILQNDLKTLKSFLQEVKGLLAQDLSTE
Specific function: Unknown
COG id: COG2445
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17263; Mature: 17263
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DIATSLIAKEGLGKPATYRETFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQ HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VYGILQNDLKTLKSFLQEVKGLLAQDLSTE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DIATSLIAKEGLGKPATYRETFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQ HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VYGILQNDLKTLKSFLQEVKGLLAQDLSTE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA