Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227575

Identifier: 21227575

GI number: 21227575

Start: 1756311

End: 1756763

Strand: Direct

Name: 21227575

Synonym: MM_1473

Alternate gene names: NA

Gene position: 1756311-1756763 (Clockwise)

Preceding gene: 21227574

Following gene: 21227580

Centisome position: 42.88

GC content: 42.6

Gene sequence:

>453_bases
TTGATAAGGAATTCCTGGCGAGGGTCTAAAATGAGAATACTTGCCCATTTAAGAGAGCTTGATGAATCCCAGAAAGACTG
GCAAAGATATCAGAATATATCGCTGGAAGACCTGAAGAAAGACAGAGATAAAAGGAATATGGTTCTTCACGCCATGCTGG
TCAGTATCCAGGCTGCTATAGATATAGCTACCAGTTTGATAGCTAAAGAGGGGCTGGGAAAGCCTGCAACATACAGAGAG
ACTTTCGAAATATTAGGGCAGGCAGGACTTATCTCAGAGGAACTCGCTGAAGAGCTCTCGGACCTGGCCGGGTTCAGAAA
TGTCCTTGTCCACATATACTGGCAGCTAGACTTTGATCAGGTATATGGAATCCTGCAAAATGATCTTAAGACTCTTAAAT
CCTTTTTACAGGAAGTTAAGGGACTATTAGCTCAGGATTTATCTACTGAATGA

Upstream 100 bases:

>100_bases
AAAGGACGTGTTATCTTCTCCAGAGACGAATCCAGCAGGATAGATTACGAATCTGAGGTTATCTCGACTTATCTGGACCT
GAAGTATATGTATGATTTGA

Downstream 100 bases:

>100_bases
ATTTTAAGCTGAAGCGCATCAAAATGCAAAGAAAACTTTCATAAATAAAAGTTCATACAGCAGACAACCTTCAGATTATT
TCTCGCAAATCTTTTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAIDIATSLIAKEGLGKPATYRE
TFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQVYGILQNDLKTLKSFLQEVKGLLAQDLSTE

Sequences:

>Translated_150_residues
MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAIDIATSLIAKEGLGKPATYRE
TFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQVYGILQNDLKTLKSFLQEVKGLLAQDLSTE
>Mature_150_residues
MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAIDIATSLIAKEGLGKPATYRE
TFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQVYGILQNDLKTLKSFLQEVKGLLAQDLSTE

Specific function: Unknown

COG id: COG2445

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17263; Mature: 17263

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DIATSLIAKEGLGKPATYRETFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQ
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VYGILQNDLKTLKSFLQEVKGLLAQDLSTE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRNSWRGSKMRILAHLRELDESQKDWQRYQNISLEDLKKDRDKRNMVLHAMLVSIQAAI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DIATSLIAKEGLGKPATYRETFEILGQAGLISEELAEELSDLAGFRNVLVHIYWQLDFDQ
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VYGILQNDLKTLKSFLQEVKGLLAQDLSTE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA