Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227570

Identifier: 21227570

GI number: 21227570

Start: 1750899

End: 1751228

Strand: Reverse

Name: 21227570

Synonym: MM_1468

Alternate gene names: NA

Gene position: 1751228-1750899 (Counterclockwise)

Preceding gene: 21227572

Following gene: 21227567

Centisome position: 42.75

GC content: 43.64

Gene sequence:

>330_bases
GTGAACGCAAAGAAATACGGAAAAACTGCTAAAGGAGACTGGTTCAGGACAGCTCTTATGCTTTTTTTATTCATTGCAGT
GACGGTTCTCTCCTCTATAGTTTTGCTCCCTGATTGCTGGTATCTCTGGTTGCTGATAGTTATCATGGGGATTCTACTGC
TCGTGATCTGGCATACCAAAAACTTCGCTTACCTCTGCCCCAAATGCGGCGAGATCTTCGAGGTTTCAGTCCTTAAAAAC
TTTCTTAGCCCAAACGGTATAAATAGAAAATACCTGAAATGCCCCAGGTGCAGAAGACGGAGCTGGGCTGAGATACTGAG
TATCAAATAA

Upstream 100 bases:

>100_bases
TGCGGATCTCATAGAAAAATAAATGTTAAGTAACTCTGAAACATTATTTTTGGCATAAAAATTTAAAACGGAAAACTGGA
ATATGGGTGGAAAGCCAATT

Downstream 100 bases:

>100_bases
TGAATAACTAAATAAATAACTAAATCAGGAATTATGGTGCTGCCCCGTTAATTAGTTGATATTTTGCTCTTCTTGTAATT
TAACAAATCTGTTAGTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNAKKYGKTAKGDWFRTALMLFLFIAVTVLSSIVLLPDCWYLWLLIVIMGILLLVIWHTKNFAYLCPKCGEIFEVSVLKN
FLSPNGINRKYLKCPRCRRRSWAEILSIK

Sequences:

>Translated_109_residues
MNAKKYGKTAKGDWFRTALMLFLFIAVTVLSSIVLLPDCWYLWLLIVIMGILLLVIWHTKNFAYLCPKCGEIFEVSVLKN
FLSPNGINRKYLKCPRCRRRSWAEILSIK
>Mature_109_residues
MNAKKYGKTAKGDWFRTALMLFLFIAVTVLSSIVLLPDCWYLWLLIVIMGILLLVIWHTKNFAYLCPKCGEIFEVSVLKN
FLSPNGINRKYLKCPRCRRRSWAEILSIK

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12715; Mature: 12715

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKKYGKTAKGDWFRTALMLFLFIAVTVLSSIVLLPDCWYLWLLIVIMGILLLVIWHTK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
NFAYLCPKCGEIFEVSVLKNFLSPNGINRKYLKCPRCRRRSWAEILSIK
CCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAKKYGKTAKGDWFRTALMLFLFIAVTVLSSIVLLPDCWYLWLLIVIMGILLLVIWHTK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
NFAYLCPKCGEIFEVSVLKNFLSPNGINRKYLKCPRCRRRSWAEILSIK
CCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA