Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227566

Identifier: 21227566

GI number: 21227566

Start: 1747558

End: 1747797

Strand: Reverse

Name: 21227566

Synonym: MM_1464

Alternate gene names: NA

Gene position: 1747797-1747558 (Counterclockwise)

Preceding gene: 21227567

Following gene: 21227564

Centisome position: 42.67

GC content: 36.25

Gene sequence:

>240_bases
ATGATCGGAGTATCCTACATATTTTTGATATTTGGATTTGTTCTTGTTTTTTCTTTTATTTTCTGGGTGTGGACCCTTGC
CGATTGCCTACGAAAAGAAACAGATGAAGGAAACACGCGCCTTATCTGGGTCATAGTTATTGTTTTTACATATATTGTAG
GAGCTCTTCTTTACTACCTTATCAGGCGGCCTAAAAGAGTCAAAGAACTTGGATATACTAAAGGAATTCAGACTATATGA

Upstream 100 bases:

>100_bases
AAAGCCACAGCAAAAAAAGCTCCACATAAAAAGCATTAAGATTAAAAAACCGCAACTGAAAACCCCAGAATAATAAAAAC
TAGAAGCAGGAAATGATAAA

Downstream 100 bases:

>100_bases
AGAGCCCTGCTCTTATAAAAAGGATCAGAGGATTCCTAAAAAGATCGTTTAATGGCTTAAAGACTATTAGGAGGAATGGA
TTCTTTTAGCTCCTCCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYLIRRPKRVKELGYTKGIQTI

Sequences:

>Translated_79_residues
MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYLIRRPKRVKELGYTKGIQTI
>Mature_79_residues
MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYLIRRPKRVKELGYTKGIQTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9328; Mature: 9328

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IRRPKRVKELGYTKGIQTI
HHCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IRRPKRVKELGYTKGIQTI
HHCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA