| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227566
Identifier: 21227566
GI number: 21227566
Start: 1747558
End: 1747797
Strand: Reverse
Name: 21227566
Synonym: MM_1464
Alternate gene names: NA
Gene position: 1747797-1747558 (Counterclockwise)
Preceding gene: 21227567
Following gene: 21227564
Centisome position: 42.67
GC content: 36.25
Gene sequence:
>240_bases ATGATCGGAGTATCCTACATATTTTTGATATTTGGATTTGTTCTTGTTTTTTCTTTTATTTTCTGGGTGTGGACCCTTGC CGATTGCCTACGAAAAGAAACAGATGAAGGAAACACGCGCCTTATCTGGGTCATAGTTATTGTTTTTACATATATTGTAG GAGCTCTTCTTTACTACCTTATCAGGCGGCCTAAAAGAGTCAAAGAACTTGGATATACTAAAGGAATTCAGACTATATGA
Upstream 100 bases:
>100_bases AAAGCCACAGCAAAAAAAGCTCCACATAAAAAGCATTAAGATTAAAAAACCGCAACTGAAAACCCCAGAATAATAAAAAC TAGAAGCAGGAAATGATAAA
Downstream 100 bases:
>100_bases AGAGCCCTGCTCTTATAAAAAGGATCAGAGGATTCCTAAAAAGATCGTTTAATGGCTTAAAGACTATTAGGAGGAATGGA TTCTTTTAGCTCCTCCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYLIRRPKRVKELGYTKGIQTI
Sequences:
>Translated_79_residues MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYLIRRPKRVKELGYTKGIQTI >Mature_79_residues MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYLIRRPKRVKELGYTKGIQTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9328; Mature: 9328
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IRRPKRVKELGYTKGIQTI HHCCHHHHHHHHHCCCCCC >Mature Secondary Structure MIGVSYIFLIFGFVLVFSFIFWVWTLADCLRKETDEGNTRLIWVIVIVFTYIVGALLYYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IRRPKRVKELGYTKGIQTI HHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA