Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227564

Identifier: 21227564

GI number: 21227564

Start: 1744351

End: 1744896

Strand: Reverse

Name: 21227564

Synonym: MM_1462

Alternate gene names: NA

Gene position: 1744896-1744351 (Counterclockwise)

Preceding gene: 21227566

Following gene: 21227560

Centisome position: 42.6

GC content: 32.78

Gene sequence:

>546_bases
ATGTCAGACCAGCATAAGGAAATAGAATGTGAACTGCTCGAAATATATAATAAAAATCTGGACCGATTTTTTTCACTGAT
AAAATTTATATTTTTAATATTTGGAGTTTATATTCTGACATTATCCAGTATATACGGCAAATTCGACATACACGCATTCG
AGAACGCAGAAACGATTTCATTTTACTCTCTTCTTGCATCCTTATTATTTGTCAGCATAGCACTTATTGTTCCGTTTTCA
CAGCTATTGATACCAAGGGAACGAAGGTTTAAACAGACTGAAAACTCGATTCAATTTCGGAATGAAGAAGAGGCAAAAAT
ATACAATAAAAAATTATATATGATAGTGAGGCAGCAGGAAAACTATTATGTAACGTCGTTTTTGCTGGTTTTGCTTTCTT
TCATTTTCTTCTGCGGCCATTTTGTATCATTTGCGATTTGCATTTCCATTCCGGTCCTTATAATTTCTGTTTTTCACTAT
CTTACATTTACCGACTGGATAAAAAAAGAAAATAAAGAGATCAGGATATTACACCATGAAGGGTAA

Upstream 100 bases:

>100_bases
AAACAAAAAACTGCAGTATAGTTCAAATAATTAAATAAATTAATCACCTTTTGAAAATGTTTAAATACATATCAGCCGTT
AATTTTATAGAGGCTGAGAT

Downstream 100 bases:

>100_bases
AAATGTATTAAACCTGACATGACAGAGACAAAAGAGTTTTCAAAACCCAGGTCTGTGTAAGAAACGAGTTTTCAAAATCG
AGGTCCGTGTAATTCAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSDQHKEIECELLEIYNKNLDRFFSLIKFIFLIFGVYILTLSSIYGKFDIHAFENAETISFYSLLASLLFVSIALIVPFS
QLLIPRERRFKQTENSIQFRNEEEAKIYNKKLYMIVRQQENYYVTSFLLVLLSFIFFCGHFVSFAICISIPVLIISVFHY
LTFTDWIKKENKEIRILHHEG

Sequences:

>Translated_181_residues
MSDQHKEIECELLEIYNKNLDRFFSLIKFIFLIFGVYILTLSSIYGKFDIHAFENAETISFYSLLASLLFVSIALIVPFS
QLLIPRERRFKQTENSIQFRNEEEAKIYNKKLYMIVRQQENYYVTSFLLVLLSFIFFCGHFVSFAICISIPVLIISVFHY
LTFTDWIKKENKEIRILHHEG
>Mature_180_residues
SDQHKEIECELLEIYNKNLDRFFSLIKFIFLIFGVYILTLSSIYGKFDIHAFENAETISFYSLLASLLFVSIALIVPFSQ
LLIPRERRFKQTENSIQFRNEEEAKIYNKKLYMIVRQQENYYVTSFLLVLLSFIFFCGHFVSFAICISIPVLIISVFHYL
TFTDWIKKENKEIRILHHEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21550; Mature: 21418

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQHKEIECELLEIYNKNLDRFFSLIKFIFLIFGVYILTLSSIYGKFDIHAFENAETIS
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
FYSLLASLLFVSIALIVPFSQLLIPRERRFKQTENSIQFRNEEEAKIYNKKLYMIVRQQE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCC
NYYVTSFLLVLLSFIFFCGHFVSFAICISIPVLIISVFHYLTFTDWIKKENKEIRILHHE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
G
C
>Mature Secondary Structure 
SDQHKEIECELLEIYNKNLDRFFSLIKFIFLIFGVYILTLSSIYGKFDIHAFENAETIS
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
FYSLLASLLFVSIALIVPFSQLLIPRERRFKQTENSIQFRNEEEAKIYNKKLYMIVRQQE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCC
NYYVTSFLLVLLSFIFFCGHFVSFAICISIPVLIISVFHYLTFTDWIKKENKEIRILHHE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA