| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227529
Identifier: 21227529
GI number: 21227529
Start: 1710575
End: 1710940
Strand: Direct
Name: 21227529
Synonym: MM_1427
Alternate gene names: NA
Gene position: 1710575-1710940 (Clockwise)
Preceding gene: 21227528
Following gene: 21227530
Centisome position: 41.76
GC content: 39.62
Gene sequence:
>366_bases ATGCTTACCAAATACTATAACGATGTAAGACCTACCCAAAATGTTATATATGCTATGATGAATGGGGTAGCCCCTAATGG AGTTACTGATACTAATGCATTACTTTATTACAAGTCAAGTAGCGGAATGAATAAACCTAACTCCGTTAAGACGACTACTG TTATATATTGGGATACGGTTGTTAATGAAATTGAAGATCATGGACCATTCATGAGCGGGACACCTACTCATGCTCGAGTT TGTTGTGGGTACCAAGATAATGGTTTTCTGACATCTTATTTGCGCATCAATGATCCCTGGCCAGTTGGTCATGCTTATTG GGAAGCATTTGGGGAGGACACTCACCGTATATATGTGAGGAGTTAA
Upstream 100 bases:
>100_bases AATAATTTTCGGTATATAAAAATACCAACCTAATAGGTAGAATCGACATTGGTGCCAATAAAACACTTGGGCAAACTACT GTCAGCCAGCAAGTGCTCAA
Downstream 100 bases:
>100_bases GACTCCTCATCTTTTTTAGAGGTAAAGAATATGAGTAAGATCAATGGGAAAATAGCTGTTTTTACCGTTTTTCTGGTTCT TGTAGTAGTTTATGGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLTKYYNDVRPTQNVIYAMMNGVAPNGVTDTNALLYYKSSSGMNKPNSVKTTTVIYWDTVVNEIEDHGPFMSGTPTHARV CCGYQDNGFLTSYLRINDPWPVGHAYWEAFGEDTHRIYVRS
Sequences:
>Translated_121_residues MLTKYYNDVRPTQNVIYAMMNGVAPNGVTDTNALLYYKSSSGMNKPNSVKTTTVIYWDTVVNEIEDHGPFMSGTPTHARV CCGYQDNGFLTSYLRINDPWPVGHAYWEAFGEDTHRIYVRS >Mature_121_residues MLTKYYNDVRPTQNVIYAMMNGVAPNGVTDTNALLYYKSSSGMNKPNSVKTTTVIYWDTVVNEIEDHGPFMSGTPTHARV CCGYQDNGFLTSYLRINDPWPVGHAYWEAFGEDTHRIYVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13738; Mature: 13738
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKYYNDVRPTQNVIYAMMNGVAPNGVTDTNALLYYKSSSGMNKPNSVKTTTVIYWDTV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEHHH VNEIEDHGPFMSGTPTHARVCCGYQDNGFLTSYLRINDPWPVGHAYWEAFGEDTHRIYVR HHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCEEEEEE S C >Mature Secondary Structure MLTKYYNDVRPTQNVIYAMMNGVAPNGVTDTNALLYYKSSSGMNKPNSVKTTTVIYWDTV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEHHH VNEIEDHGPFMSGTPTHARVCCGYQDNGFLTSYLRINDPWPVGHAYWEAFGEDTHRIYVR HHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCEEEEEE S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA