| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is thrA [C]
Identifier: 21227519
GI number: 21227519
Start: 1699001
End: 1700440
Strand: Reverse
Name: thrA [C]
Synonym: MM_1417
Alternate gene names: 21227519
Gene position: 1700440-1699001 (Counterclockwise)
Preceding gene: 21227522
Following gene: 21227518
Centisome position: 41.51
GC content: 47.08
Gene sequence:
>1440_bases ATGCTAAAACGTGATCCGATCATGAAAATAGTAATGAAATTTGGAGGAACTTCCGTTGGGGACGGAAAAAAGATCCGTCA TGTTGCCCATCTTCTCAAAAAATACAATGAGGAGGGCAACCAGATTGTGGTGGTAACCTCGGCACTCGGTGGAGTAACCG ATAGGCTTCTGGAAAATGCTCGCCTTGCCTCAACAAAGGGCAAGGTTTCGCTTGTCAAAGAATTTAAAACAGAACTTACA AACAAACACCACGAAGCCGTGAGGGACGCCATTGAAGACCCCAATGTCGCAAAAGATGTCCTCCACATCCTTGACCTCAG GATTGACGAGCTTGAAAAAGCCCTGATCGGTATCTGCTATCTGGGTGAACTTACAAACAGGTCAATCGATTATATTTCTT CGTACGGAGAACGTCTGGCGGCTCCAATAATTTCAGGCGCTGTCCGATCCCTGGGGATCCCATCAATCGAATACACCGGG GGAGAGGCAGGGATTTTAACCACATCGGATTACGGAAACGCCCGTCCTCTTGAAAAGACATACGAGCTCGTATCAAAAAG GCTTGGGTGCAGGCTTGATTCTCATATCCTTGTGGTCACAGGCTTCATAGGGGAAAATGAAGACGGGATAATTACCACCC TTGGAAGAAGCGGGTCCGATTTCTCAGCTTCCATACTTGGAGCAGCCCTGAAAGCTGACGAGATCTGGCTCTGGAAAGAA GTTAACGGGATCATGACAACGGACCCGAGAATCGTTCCCGAAGCAAAGACCATCCCGCAGATCTCATATGCAGAAGCCAT GGAACTCTCTTATTTCGGAGCAAACGTTCTGCACCCGCGTACTATTGAACCGGCAATGCGCGAACACATTCCCGTAAGGG TCAAAAACACCTTTGATCCGGAGTTCCCCGGTACACTGGTAGTATCTGAGAAGTTCCAGTGCAAGCATGTTGTAAAGGCA GTGAGCCTGATCAAAAATGTAGCCCTTATTAACATCTCAGGCGCGGAAATGGCAGGGACAATCGGGACTGTAGCAAGGCT CTTTACCGCTCTTGCAAGGGCAGGGGTAAATATTGTTATGATCAGCCAGGGGTCCTCAGAGTCCAACCTATCTTTCGTTG TCAGTGAGGCTCATGTGGAACCTGCGTTAAAAGCTCTTCATGCAGAATTCAACCGTGAAATCATAAAGGAAATTACTTCG GACAAAAATGTATGTGTGGTTGCGGTTGTTGGTGCTGGGATGGCAGGAACTCCCGGAGTGGCAAAAAGGGTATTCGGAGC ACTTGGGAATTCAATGATTAATATTATTATGATAAGCCAGGGCTCTTCCCAGTACAATATCTCTTTCGTTGTCAGGGAAG ATGACGCATTTGCCGCAGTCAAGACACTGCACGACGAATTCGAACTTTATAATGGAAATGGAATTGAAAAAAAGCTGTAA
Upstream 100 bases:
>100_bases ATTTAGCCGTAAATTCTGATCGCAATGGTCAGATTAATTAAGATTCAGAACACTAAGGATAACATAGTACAAAAAATTAA AATGTGAGATACCCGACTTA
Downstream 100 bases:
>100_bases AGCTTGCAGGAATGGTCACAGAATGAGTGAAAAGCACTTAACATACGCGGATTCGGGCGTGGATATTAAAGAGGAAGAAA AAACTGTCAAAACCCTTATC
Product: aspartate kinase
Products: NA
Alternate protein names: Aspartate kinase [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MLKRDPIMKIVMKFGGTSVGDGKKIRHVAHLLKKYNEEGNQIVVVTSALGGVTDRLLENARLASTKGKVSLVKEFKTELT NKHHEAVRDAIEDPNVAKDVLHILDLRIDELEKALIGICYLGELTNRSIDYISSYGERLAAPIISGAVRSLGIPSIEYTG GEAGILTTSDYGNARPLEKTYELVSKRLGCRLDSHILVVTGFIGENEDGIITTLGRSGSDFSASILGAALKADEIWLWKE VNGIMTTDPRIVPEAKTIPQISYAEAMELSYFGANVLHPRTIEPAMREHIPVRVKNTFDPEFPGTLVVSEKFQCKHVVKA VSLIKNVALINISGAEMAGTIGTVARLFTALARAGVNIVMISQGSSESNLSFVVSEAHVEPALKALHAEFNREIIKEITS DKNVCVVAVVGAGMAGTPGVAKRVFGALGNSMINIIMISQGSSQYNISFVVREDDAFAAVKTLHDEFELYNGNGIEKKL
Sequences:
>Translated_479_residues MLKRDPIMKIVMKFGGTSVGDGKKIRHVAHLLKKYNEEGNQIVVVTSALGGVTDRLLENARLASTKGKVSLVKEFKTELT NKHHEAVRDAIEDPNVAKDVLHILDLRIDELEKALIGICYLGELTNRSIDYISSYGERLAAPIISGAVRSLGIPSIEYTG GEAGILTTSDYGNARPLEKTYELVSKRLGCRLDSHILVVTGFIGENEDGIITTLGRSGSDFSASILGAALKADEIWLWKE VNGIMTTDPRIVPEAKTIPQISYAEAMELSYFGANVLHPRTIEPAMREHIPVRVKNTFDPEFPGTLVVSEKFQCKHVVKA VSLIKNVALINISGAEMAGTIGTVARLFTALARAGVNIVMISQGSSESNLSFVVSEAHVEPALKALHAEFNREIIKEITS DKNVCVVAVVGAGMAGTPGVAKRVFGALGNSMINIIMISQGSSQYNISFVVREDDAFAAVKTLHDEFELYNGNGIEKKL >Mature_479_residues MLKRDPIMKIVMKFGGTSVGDGKKIRHVAHLLKKYNEEGNQIVVVTSALGGVTDRLLENARLASTKGKVSLVKEFKTELT NKHHEAVRDAIEDPNVAKDVLHILDLRIDELEKALIGICYLGELTNRSIDYISSYGERLAAPIISGAVRSLGIPSIEYTG GEAGILTTSDYGNARPLEKTYELVSKRLGCRLDSHILVVTGFIGENEDGIITTLGRSGSDFSASILGAALKADEIWLWKE VNGIMTTDPRIVPEAKTIPQISYAEAMELSYFGANVLHPRTIEPAMREHIPVRVKNTFDPEFPGTLVVSEKFQCKHVVKA VSLIKNVALINISGAEMAGTIGTVARLFTALARAGVNIVMISQGSSESNLSFVVSEAHVEPALKALHAEFNREIIKEITS DKNVCVVAVVGAGMAGTPGVAKRVFGALGNSMINIIMISQGSSQYNISFVVREDDAFAAVKTLHDEFELYNGNGIEKKL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=463, Percent_Identity=33.9092872570194, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1790455, Length=467, Percent_Identity=30.6209850107066, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1790376, Length=426, Percent_Identity=25.5868544600939, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6320893, Length=493, Percent_Identity=28.6004056795132, Blast_Score=188, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 51915; Mature: 51915
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRDPIMKIVMKFGGTSVGDGKKIRHVAHLLKKYNEEGNQIVVVTSALGGVTDRLLENA CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCC RLASTKGKVSLVKEFKTELTNKHHEAVRDAIEDPNVAKDVLHILDLRIDELEKALIGICY HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHH LGELTNRSIDYISSYGERLAAPIISGAVRSLGIPSIEYTGGEAGILTTSDYGNARPLEKT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCHHHH YELVSKRLGCRLDSHILVVTGFIGENEDGIITTLGRSGSDFSASILGAALKADEIWLWKE HHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEE VNGIMTTDPRIVPEAKTIPQISYAEAMELSYFGANVLHPRTIEPAMREHIPVRVKNTFDP CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCC EFPGTLVVSEKFQCKHVVKAVSLIKNVALINISGAEMAGTIGTVARLFTALARAGVNIVM CCCCEEEEECCHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEE ISQGSSESNLSFVVSEAHVEPALKALHAEFNREIIKEITSDKNVCVVAVVGAGMAGTPGV EECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHH AKRVFGALGNSMINIIMISQGSSQYNISFVVREDDAFAAVKTLHDEFELYNGNGIEKKL HHHHHHHHCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MLKRDPIMKIVMKFGGTSVGDGKKIRHVAHLLKKYNEEGNQIVVVTSALGGVTDRLLENA CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCC RLASTKGKVSLVKEFKTELTNKHHEAVRDAIEDPNVAKDVLHILDLRIDELEKALIGICY HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHH LGELTNRSIDYISSYGERLAAPIISGAVRSLGIPSIEYTGGEAGILTTSDYGNARPLEKT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCHHHH YELVSKRLGCRLDSHILVVTGFIGENEDGIITTLGRSGSDFSASILGAALKADEIWLWKE HHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEE VNGIMTTDPRIVPEAKTIPQISYAEAMELSYFGANVLHPRTIEPAMREHIPVRVKNTFDP CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCC EFPGTLVVSEKFQCKHVVKAVSLIKNVALINISGAEMAGTIGTVARLFTALARAGVNIVM CCCCEEEEECCHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEE ISQGSSESNLSFVVSEAHVEPALKALHAEFNREIIKEITSDKNVCVVAVVGAGMAGTPGV EECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHH AKRVFGALGNSMINIIMISQGSSQYNISFVVREDDAFAAVKTLHDEFELYNGNGIEKKL HHHHHHHHCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]