Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227512

Identifier: 21227512

GI number: 21227512

Start: 1692725

End: 1693774

Strand: Direct

Name: 21227512

Synonym: MM_1410

Alternate gene names: NA

Gene position: 1692725-1693774 (Clockwise)

Preceding gene: 21227511

Following gene: 21227513

Centisome position: 41.32

GC content: 41.71

Gene sequence:

>1050_bases
TTGATTCGCAAAAACGTTTCTATGGAAGACGAATATCTCCAGAAATTGCAGCCCTTCCTGGAAAAAAATAATGGGAACCT
GAGTGCTGCAATCAGGGATGTAATAGAGTTCGCGGATGCTGCTCTTCAGGGCCATGAGTCTGTAGAAGATGCCCTGGAAT
ATTTTACACAGAACTCCACAAAGTATCCTGAAATTCGCAATAATCTGATCGAGAGCGGGGAATGCATACTCGTCAGTCAG
CTCTCATTCAGGTGGCTTATCGAAAATACCGATGGGATACTTGTAGATGACGAGCTGGTAAGTGAGATTTTCAATCCTTA
TCAGATCAAGAATGTCCCGGACCTTCTTGAGTATCTTAATATACGCAGTCAGAATATGGGGTGGGAGGTTGAAGCTTACT
CCAGTATCTGGGAAGACAACACCGAGGTCATAGTAATTGAGAACGGGGATCCCAGTTTGAGAGCATACCTTGCTGAGGCA
ATTTCCATATTTATCGGCCGCCATTTGAACCTTGATGTTCCTTTTGTCCACAGGAAATCCAATTCAATTCGCATTTTCCT
CAAGGAACACAGGTCTTACACGGATGTCCCCCCGGGTATTAGAAAAAATTTCGGGACTCTTGACTATACTTTTAAAGAAA
TCAGGAGCAAGCCAGATTTCTGGAATTCTTTGGTGGAAAGATACAGGTTGCAGAGGTATCAGCGTGTAAACCTTAACAAG
GACGTCTTTGAGACATTCCTCTCTGGAGGCATCCCGGATGTGACAAATTTTATTGAGGCATCTGCAGGCAAACCCATCAG
GGAAATTCCACTTTATGAATTACTTGCAATTTGCAAAAGATTAATTACCGTCACCCAGCTGGCAAATGATCTTGAGCGGA
CAGTTGAGAGGGGAAAAATAAGTATAAAAATCAGGCATCAATTTTCCGAAGAAACTGCTATTGAAAAACTTACAGAGTTT
TTCTCTAAATTATTCAAAATGGCAGGCTGCACATTTGAGATCAGGTCAATATCAAATCTGATTATTATTGAGTTTGCAGA
TTCCTCTTAA

Upstream 100 bases:

>100_bases
ATAAGCCTGATTATACTGTTTAAGCTTATATTGTACCTGTATTGTACCTGTAACGCCAGACGATTTGTTGAAGCAAAATT
TTTGTAAGCAGGGATAACCT

Downstream 100 bases:

>100_bases
TTTATCTTATATAAAATGTTATTGTCGTTGCCTGTTAATTCATTTTCCCGCGGCTGTTATTATTGATACCTGCTAATTTA
TCTTCCCACAACTGTTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MIRKNVSMEDEYLQKLQPFLEKNNGNLSAAIRDVIEFADAALQGHESVEDALEYFTQNSTKYPEIRNNLIESGECILVSQ
LSFRWLIENTDGILVDDELVSEIFNPYQIKNVPDLLEYLNIRSQNMGWEVEAYSSIWEDNTEVIVIENGDPSLRAYLAEA
ISIFIGRHLNLDVPFVHRKSNSIRIFLKEHRSYTDVPPGIRKNFGTLDYTFKEIRSKPDFWNSLVERYRLQRYQRVNLNK
DVFETFLSGGIPDVTNFIEASAGKPIREIPLYELLAICKRLITVTQLANDLERTVERGKISIKIRHQFSEETAIEKLTEF
FSKLFKMAGCTFEIRSISNLIIIEFADSS

Sequences:

>Translated_349_residues
MIRKNVSMEDEYLQKLQPFLEKNNGNLSAAIRDVIEFADAALQGHESVEDALEYFTQNSTKYPEIRNNLIESGECILVSQ
LSFRWLIENTDGILVDDELVSEIFNPYQIKNVPDLLEYLNIRSQNMGWEVEAYSSIWEDNTEVIVIENGDPSLRAYLAEA
ISIFIGRHLNLDVPFVHRKSNSIRIFLKEHRSYTDVPPGIRKNFGTLDYTFKEIRSKPDFWNSLVERYRLQRYQRVNLNK
DVFETFLSGGIPDVTNFIEASAGKPIREIPLYELLAICKRLITVTQLANDLERTVERGKISIKIRHQFSEETAIEKLTEF
FSKLFKMAGCTFEIRSISNLIIIEFADSS
>Mature_349_residues
MIRKNVSMEDEYLQKLQPFLEKNNGNLSAAIRDVIEFADAALQGHESVEDALEYFTQNSTKYPEIRNNLIESGECILVSQ
LSFRWLIENTDGILVDDELVSEIFNPYQIKNVPDLLEYLNIRSQNMGWEVEAYSSIWEDNTEVIVIENGDPSLRAYLAEA
ISIFIGRHLNLDVPFVHRKSNSIRIFLKEHRSYTDVPPGIRKNFGTLDYTFKEIRSKPDFWNSLVERYRLQRYQRVNLNK
DVFETFLSGGIPDVTNFIEASAGKPIREIPLYELLAICKRLITVTQLANDLERTVERGKISIKIRHQFSEETAIEKLTEF
FSKLFKMAGCTFEIRSISNLIIIEFADSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40397; Mature: 40397

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKNVSMEDEYLQKLQPFLEKNNGNLSAAIRDVIEFADAALQGHESVEDALEYFTQNST
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
KYPEIRNNLIESGECILVSQLSFRWLIENTDGILVDDELVSEIFNPYQIKNVPDLLEYLN
CCHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEECHHHHHHHCCCEECCCHHHHHHHHH
IRSQNMGWEVEAYSSIWEDNTEVIVIENGDPSLRAYLAEAISIFIGRHLNLDVPFVHRKS
CCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
NSIRIFLKEHRSYTDVPPGIRKNFGTLDYTFKEIRSKPDFWNSLVERYRLQRYQRVNLNK
CCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH
DVFETFLSGGIPDVTNFIEASAGKPIREIPLYELLAICKRLITVTQLANDLERTVERGKI
HHHHHHHCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
SIKIRHQFSEETAIEKLTEFFSKLFKMAGCTFEIRSISNLIIIEFADSS
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCC
>Mature Secondary Structure
MIRKNVSMEDEYLQKLQPFLEKNNGNLSAAIRDVIEFADAALQGHESVEDALEYFTQNST
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
KYPEIRNNLIESGECILVSQLSFRWLIENTDGILVDDELVSEIFNPYQIKNVPDLLEYLN
CCHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEECHHHHHHHCCCEECCCHHHHHHHHH
IRSQNMGWEVEAYSSIWEDNTEVIVIENGDPSLRAYLAEAISIFIGRHLNLDVPFVHRKS
CCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
NSIRIFLKEHRSYTDVPPGIRKNFGTLDYTFKEIRSKPDFWNSLVERYRLQRYQRVNLNK
CCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH
DVFETFLSGGIPDVTNFIEASAGKPIREIPLYELLAICKRLITVTQLANDLERTVERGKI
HHHHHHHCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
SIKIRHQFSEETAIEKLTEFFSKLFKMAGCTFEIRSISNLIIIEFADSS
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA