| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227497
Identifier: 21227497
GI number: 21227497
Start: 1679255
End: 1679719
Strand: Direct
Name: 21227497
Synonym: MM_1395
Alternate gene names: NA
Gene position: 1679255-1679719 (Clockwise)
Preceding gene: 21227496
Following gene: 21227502
Centisome position: 40.99
GC content: 33.33
Gene sequence:
>465_bases ATGAAATTTATATGCCCACTTTTTGTTGTCAACAATATGGAAATTTCCAGAAACTTTTACGAAAAAGTTCTCAACCAGAA AGTACAGTACGATTTTGGCGAAAATGTATCGTTTGAGAGTGGTTTTGCAATTCATCTAAAACCACACTTTTCAGAATTAA CAGGCATAAACAGAAATGATATTATTCAAAAATCAAATAATTCCGAATTGTATTTTGAAGAAGAGGATTTAGATAGTTTT CTTAAAAAGCTGAAAGAAATGAATTCCATTGAATATGTACATGAATTAAAAGAACAGCCCTGGGGACAGCGTGTAATCAG ATTTTACGATCCTGATATGCACATTATTGAAGTTGGCGAACCAATGGAAAGTGTGGTAAAAAGACTTTTGAGTGAAGGGT TATCGGTTGAAGAAACCTCAAAACGTACTTTAATGCCAGAGGAGTTTGTCAGGCAGTTTTTATGA
Upstream 100 bases:
>100_bases GGATTACTATTGAATTTATTTACTACTATTTAATCTGAATATCCCTGGAAAAAGATAGATTACATCCGATTATATTCATT TATAAAAAAGAGGTAATAAT
Downstream 100 bases:
>100_bases ACAATTGATGGCTGGCAGTCCCGACTTTCAATTTAGTTTTACATTATTCATTTGCTGTTACTTCTTTTTTCACTTCTCTT TCTTCTTTTTCACTTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase; Lactoylglutation Lyase; Glyoxalase Family Protein; Glyoxalase/Bleomycin Resistance-Like Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKFICPLFVVNNMEISRNFYEKVLNQKVQYDFGENVSFESGFAIHLKPHFSELTGINRNDIIQKSNNSELYFEEEDLDSF LKKLKEMNSIEYVHELKEQPWGQRVIRFYDPDMHIIEVGEPMESVVKRLLSEGLSVEETSKRTLMPEEFVRQFL
Sequences:
>Translated_154_residues MKFICPLFVVNNMEISRNFYEKVLNQKVQYDFGENVSFESGFAIHLKPHFSELTGINRNDIIQKSNNSELYFEEEDLDSF LKKLKEMNSIEYVHELKEQPWGQRVIRFYDPDMHIIEVGEPMESVVKRLLSEGLSVEETSKRTLMPEEFVRQFL >Mature_154_residues MKFICPLFVVNNMEISRNFYEKVLNQKVQYDFGENVSFESGFAIHLKPHFSELTGINRNDIIQKSNNSELYFEEEDLDSF LKKLKEMNSIEYVHELKEQPWGQRVIRFYDPDMHIIEVGEPMESVVKRLLSEGLSVEETSKRTLMPEEFVRQFL
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18290; Mature: 18290
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFICPLFVVNNMEISRNFYEKVLNQKVQYDFGENVSFESGFAIHLKPHFSELTGINRND CCEECHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHCCCCHHH IIQKSNNSELYFEEEDLDSFLKKLKEMNSIEYVHELKEQPWGQRVIRFYDPDMHIIEVGE CEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCC PMESVVKRLLSEGLSVEETSKRTLMPEEFVRQFL CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHC >Mature Secondary Structure MKFICPLFVVNNMEISRNFYEKVLNQKVQYDFGENVSFESGFAIHLKPHFSELTGINRND CCEECHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHCCCCHHH IIQKSNNSELYFEEEDLDSFLKKLKEMNSIEYVHELKEQPWGQRVIRFYDPDMHIIEVGE CEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCC PMESVVKRLLSEGLSVEETSKRTLMPEEFVRQFL CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA