| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227484
Identifier: 21227484
GI number: 21227484
Start: 1661336
End: 1662067
Strand: Reverse
Name: 21227484
Synonym: MM_1382
Alternate gene names: NA
Gene position: 1662067-1661336 (Counterclockwise)
Preceding gene: 21227485
Following gene: 21227481
Centisome position: 40.57
GC content: 42.35
Gene sequence:
>732_bases ATGCAAAATGAAGGTGTCCCATCATCAGGATATTCAGAAATCAGGAGACTGATGGAAACTGGAGAGCCTGTGTGCATAAC CTTTGAAACAGAGGAAGGGGATGTGAAAAAAAGGCTTCATGGAACAATGCCCTTCCAGAAATCAGTTCCTGAAGAAAAAA CAGCCGGAGAAGAAAGGAATGAACTTCCCGGGAAATCCGGCTTCCTTTTTTGTGAACTTGTGCAAAAAGCCCGCATGGGA GAAAAGTTCAGAATTTCAGGACAGAGCTGTTCTCCCGGAGATTATGTCCTTGGGCTTTCCGAAAAGAGCCCTGCTGAATA TTATCTCAGGTCCGGCAGGTACAGTAATAAACAGGATGCAGAAAAAGCAGCTCTATCCCTTCCGAGATTAAAGAGAAAAT TTCATTCCATTGTGATAGAACCCTTATCAGTTAATAGAGATATTTTTGATGTGCTTATTCTCTTTCTTAAACCTGAGAGA GCCATGAGAGTTGTCCAGGCAAATGCCTATTCCGGAGGGAAAAGGACAGTAATGGATACAATGGGTGCAGCCTCAATCTG TGGAGACTGTACCGTATTTGCTCTTGAACAGGGCATAGGTTTATCTTTCGGGTGTAAAGGGTCAAGAAAACACAGTGGAT ATAAAGATTTTGAAGTTCCCCTGGGAATTGCTTTTGAAAAAATAAAGGAAATTGAAGAAGGGCTTTCAAAGATCCCCGAA ACAACCGAGTAA
Upstream 100 bases:
>100_bases AAGATAGATATCAGAGGCCCGGTCTTCACCTCGGTAAAAGCGGAATTCGAGTAAAATAAGCCGGCAAACAGAAATAATAA TGCACAACGGAATGGGCTGT
Downstream 100 bases:
>100_bases AGATGCTGAACAGTACTGTAGTAGCGCAGGGTGAATTACATCTCTTGGCTTTTTAGAATAATTTATCGAAGAAGTTCACC ACGCTTTCCAGCCCGATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERNELPGKSGFLFCELVQKARMG EKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDAEKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPER AMRVVQANAYSGGKRTVMDTMGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE TTE
Sequences:
>Translated_243_residues MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERNELPGKSGFLFCELVQKARMG EKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDAEKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPER AMRVVQANAYSGGKRTVMDTMGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE TTE >Mature_243_residues MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERNELPGKSGFLFCELVQKARMG EKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDAEKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPER AMRVVQANAYSGGKRTVMDTMGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE TTE
Specific function: Unknown
COG id: COG2043
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003748 [H]
Pfam domain/function: PF02596 DUF169 [H]
EC number: NA
Molecular weight: Translated: 26963; Mature: 26963
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERN CCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHCCCCHHHCCCHHH ELPGKSGFLFCELVQKARMGEKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDA CCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHCCCCCCHHHH EKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPERAMRVVQANAYSGGKRTVMDT HHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH MGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE HCHHHHHCCHHEEEECCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC TTE CCC >Mature Secondary Structure MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERN CCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHCCCCHHHCCCHHH ELPGKSGFLFCELVQKARMGEKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDA CCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHCCCCCCHHHH EKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPERAMRVVQANAYSGGKRTVMDT HHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH MGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE HCHHHHHCCHHEEEECCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC TTE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]