Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227484

Identifier: 21227484

GI number: 21227484

Start: 1661336

End: 1662067

Strand: Reverse

Name: 21227484

Synonym: MM_1382

Alternate gene names: NA

Gene position: 1662067-1661336 (Counterclockwise)

Preceding gene: 21227485

Following gene: 21227481

Centisome position: 40.57

GC content: 42.35

Gene sequence:

>732_bases
ATGCAAAATGAAGGTGTCCCATCATCAGGATATTCAGAAATCAGGAGACTGATGGAAACTGGAGAGCCTGTGTGCATAAC
CTTTGAAACAGAGGAAGGGGATGTGAAAAAAAGGCTTCATGGAACAATGCCCTTCCAGAAATCAGTTCCTGAAGAAAAAA
CAGCCGGAGAAGAAAGGAATGAACTTCCCGGGAAATCCGGCTTCCTTTTTTGTGAACTTGTGCAAAAAGCCCGCATGGGA
GAAAAGTTCAGAATTTCAGGACAGAGCTGTTCTCCCGGAGATTATGTCCTTGGGCTTTCCGAAAAGAGCCCTGCTGAATA
TTATCTCAGGTCCGGCAGGTACAGTAATAAACAGGATGCAGAAAAAGCAGCTCTATCCCTTCCGAGATTAAAGAGAAAAT
TTCATTCCATTGTGATAGAACCCTTATCAGTTAATAGAGATATTTTTGATGTGCTTATTCTCTTTCTTAAACCTGAGAGA
GCCATGAGAGTTGTCCAGGCAAATGCCTATTCCGGAGGGAAAAGGACAGTAATGGATACAATGGGTGCAGCCTCAATCTG
TGGAGACTGTACCGTATTTGCTCTTGAACAGGGCATAGGTTTATCTTTCGGGTGTAAAGGGTCAAGAAAACACAGTGGAT
ATAAAGATTTTGAAGTTCCCCTGGGAATTGCTTTTGAAAAAATAAAGGAAATTGAAGAAGGGCTTTCAAAGATCCCCGAA
ACAACCGAGTAA

Upstream 100 bases:

>100_bases
AAGATAGATATCAGAGGCCCGGTCTTCACCTCGGTAAAAGCGGAATTCGAGTAAAATAAGCCGGCAAACAGAAATAATAA
TGCACAACGGAATGGGCTGT

Downstream 100 bases:

>100_bases
AGATGCTGAACAGTACTGTAGTAGCGCAGGGTGAATTACATCTCTTGGCTTTTTAGAATAATTTATCGAAGAAGTTCACC
ACGCTTTCCAGCCCGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERNELPGKSGFLFCELVQKARMG
EKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDAEKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPER
AMRVVQANAYSGGKRTVMDTMGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE
TTE

Sequences:

>Translated_243_residues
MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERNELPGKSGFLFCELVQKARMG
EKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDAEKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPER
AMRVVQANAYSGGKRTVMDTMGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE
TTE
>Mature_243_residues
MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERNELPGKSGFLFCELVQKARMG
EKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDAEKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPER
AMRVVQANAYSGGKRTVMDTMGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE
TTE

Specific function: Unknown

COG id: COG2043

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003748 [H]

Pfam domain/function: PF02596 DUF169 [H]

EC number: NA

Molecular weight: Translated: 26963; Mature: 26963

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERN
CCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHCCCCHHHCCCHHH
ELPGKSGFLFCELVQKARMGEKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDA
CCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHCCCCCCHHHH
EKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPERAMRVVQANAYSGGKRTVMDT
HHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH
MGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE
HCHHHHHCCHHEEEECCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
TTE
CCC
>Mature Secondary Structure
MQNEGVPSSGYSEIRRLMETGEPVCITFETEEGDVKKRLHGTMPFQKSVPEEKTAGEERN
CCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHCCCCHHHCCCHHH
ELPGKSGFLFCELVQKARMGEKFRISGQSCSPGDYVLGLSEKSPAEYYLRSGRYSNKQDA
CCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHCCCCCCHHHH
EKAALSLPRLKRKFHSIVIEPLSVNRDIFDVLILFLKPERAMRVVQANAYSGGKRTVMDT
HHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH
MGAASICGDCTVFALEQGIGLSFGCKGSRKHSGYKDFEVPLGIAFEKIKEIEEGLSKIPE
HCHHHHHCCHHEEEECCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
TTE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]