Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is secG

Identifier: 21227474

GI number: 21227474

Start: 1643373

End: 1643540

Strand: Direct

Name: secG

Synonym: MM_1372

Alternate gene names: 21227474

Gene position: 1643373-1643540 (Clockwise)

Preceding gene: 21227473

Following gene: 21227475

Centisome position: 40.12

GC content: 47.62

Gene sequence:

>168_bases
ATGGCTAAAAAATCAGGTTCCGGACTTCAGTCTTCCGCAGGGCTCATGCGCTACTACGAAGCTGACAAAAATGCAATTCA
CATCCAGCCCAAAACAGTGCTGATCGCAGGTGCTCTTGTGGGCATAGCAGTAATATTCTTAAGTGCTGTAAACGGCTTCT
GGCCGTAA

Upstream 100 bases:

>100_bases
TTAATATATGGAGTTAAATCTCCAGTAAGCTAAATCTTCCAATTAAAACGTAACAATTAACTAATTAGCATTACATTGCA
TTCATACAGGTGTCTTACTC

Downstream 100 bases:

>100_bases
TTGCTTTTTTCTGGCAGGGTACTCTTGAGCAAGAATGGTTCTGGAAAAAAAGTAATTGGAAAAACGAAAAGATCGTCTTC
TGGCGCCAGAACTTTTAAAC

Product: preprotein translocase subunit SecG

Products: NA

Alternate protein names: Protein transport protein Sec61 subunit beta homolog

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MAKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP

Sequences:

>Translated_55_residues
MAKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP
>Mature_54_residues
AKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP

Specific function: Involved in protein export. The function of the beta subunit is unknown, but it may be involved in stabilization of the trimeric complex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SEC61-beta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECG_METMA (Q8PX50)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633396.1
- GeneID:   1479714
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1372
- NMPDR:   fig|192952.1.peg.1372
- HOGENOM:   HBG732980
- OMA:   MRYYEAD
- ProtClustDB:   PRK01253
- BioCyc:   MMAZ192952:MM1372-MONOMER
- HAMAP:   MF_00751
- InterPro:   IPR005609

Pfam domain/function: PF03911 Sec61_beta

EC number: NA

Molecular weight: Translated: 5792; Mature: 5661

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe854aec)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP
CCCCCCCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
AKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP
CCCCCCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12125824