| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227359
Identifier: 21227359
GI number: 21227359
Start: 1492863
End: 1493555
Strand: Reverse
Name: 21227359
Synonym: MM_1257
Alternate gene names: NA
Gene position: 1493555-1492863 (Counterclockwise)
Preceding gene: 21227360
Following gene: 21227358
Centisome position: 36.46
GC content: 44.44
Gene sequence:
>693_bases ATGGACCCAGCAAAATTACTTGACATCCTGGGGAATGAAAACCGCAGGAAGATAATTCAGCTTCTTGCAAACCGCCCCTG CTATGTCAGTGAGATTTCAGGCAGGCTGGGGGTAGGACCAAAGGCGATTATCAGTCACCTTAGCCTGTTAGAACAGGCAG GGCTGATCGAGTGCAGTGTGGACGAGCAAAGGCGCAAATATTTCAATATTGCAAATAATGTGCGGCTTGAGGTATCTGTA TCACCTTATTCATATACGATGGCTCTTCAGGACATCAACTTCGACAGGGAGAAAAAACGGGAAAGTTATGCTGTCGAAAA TAATGGACCTGCTACCAGAGATGAATCATCCTGCTTCTTCCTGAAGCTGAGCGAAAGGCTCCGTGAACTTAGAATAAAAC AGGAAGAGCTTGCACAGATGCAGAAACAACTTCAGGCTGAATATACGGAATTGATGGATAAATGCCTGGATTCCATCGAG GATATTGCCAGAAACCCTGTAGAATGTGAGCTTCTGTTCGAGCTTTTGAAAAACGAGGCTACAGCGGCAGTCCTTTGCTA TAACCTGCGTCTGCATCCCAGCATTATAAACTCTAACCTTATGGATCTTGCAGAAAGAGGCTTTGTTGAGTATACGATCA AAAATAGCCAGCAGTACTGGAAAATATGTGAGACCGGAGTTGAAAATAAATGA
Upstream 100 bases:
>100_bases AAATTACATAAAAACAGAACCGTAAACTCATCATTAATTAACTCATCATTAATTAATAGTAATTTCAATAGTAAATTTCA GCGATCACCAGAGGGGGAAA
Downstream 100 bases:
>100_bases CTGAAGAAATTAATTTGAGAGTAGCTGAGGCTTATCATAAAGACGTGGGAAGGGGAATTGCAAGAATCGACACCCGTTTA ATGCAGGAAATGGGACTTGT
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator MarR Family; Transcriptional Regulator Arsr Family; Regulatory Protein ArsR; Transcription Regulator; Archaeal Heat Shock Regulator ArsR Family; Conditioned Medium-Induced; Archaeal Heat Shock Regulator; Hth5 Family Protein; ArS Family Heat Shock Protein; Heat Shock Regulator; Transcriptional Regulator TrmB
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSVDEQRRKYFNIANNVRLEVSV SPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFFLKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIE DIARNPVECELLFELLKNEATAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK
Sequences:
>Translated_230_residues MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSVDEQRRKYFNIANNVRLEVSV SPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFFLKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIE DIARNPVECELLFELLKNEATAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK >Mature_230_residues MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSVDEQRRKYFNIANNVRLEVSV SPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFFLKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIE DIARNPVECELLFELLKNEATAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK
Specific function: Unknown
COG id: COG1777
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26501; Mature: 26501
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSV CCHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCEEECC DEQRRKYFNIANNVRLEVSVSPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFF CHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEE LKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIEDIARNPVECELLFELLKNEA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC TAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK CEEEEEEECEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCC >Mature Secondary Structure MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSV CCHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCEEECC DEQRRKYFNIANNVRLEVSVSPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFF CHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEE LKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIEDIARNPVECELLFELLKNEA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC TAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK CEEEEEEECEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA