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The map label for this gene is rbcL

Identifier: 21227351

GI number: 21227351

Start: 1480214

End: 1481500

Strand: Reverse

Name: rbcL

Synonym: MM_1249

Alternate gene names: 21227351

Gene position: 1481500-1480214 (Counterclockwise)

Preceding gene: 21227352

Following gene: 21227350

Centisome position: 36.17

GC content: 49.88

Gene sequence:

>1287_bases
ATGAGAAGGGACTACATTGACATCGGCTACAGCCCGAAAGAGACGGATCTGGTCTGTGAATTCCACATTGAACCAACAGC
AGGAGTGAATTTTGAAGAAGCTGCCACCCATCTGGCAGGGGAAAGTTCCATAGATTCCTGGACTGAGATTGCTACGCTGA
GTCCTGAACTTGCAGAGAAACTGAAACCCCATGTCTTTTATGCGGATGAGGGTGCACAGACTGTAAGGGTTGCTTATTCG
GAAGAGCTTTTTGAGCTGGGTTCTGTCCCTCAGGTCCTCAGTGCTGTTGCAGGGAATATCCTGAGCATGAAAATAGTTGA
TAACGTAAGGCTGCAGGATATCGCTTTCCCGAAATCAATGATTAATGAATTCAAAGGCCCTAACTTCGGACTGCCGGGGA
TCAGAAAACTTGTGGGCGTACAGGACAGGCCTCTCATAGGGACTATTGTTAAACCGAAAGTCGGCCTGAACTCTGAAAAG
CACGCTGAGGTCGCTTACAATTCTTTTGTCGGGGGCTGCGACCTTGTTAAGGACGATGAAAATCTGAGTGATCAGAAATT
TAACAGTTTTGAGAAGAGAGCCGAGCTTACCCTGAAACTTGCAGAAAAGGCAGAGTCTGAGACAGGGGAAAAGAAGATGT
ACCTCTGCAATGTCACTGCCCCCACCTGCAGGGAAATGATCCGCCGCATGAACTTCCTTAAAGACCTTGGAGCCAGTTAT
GTAATGGTTGACATCGTGCCCGCTGGCTGGACTGCGATTCAAACCCTGCGCGAGGAAGCTGAGGATGCGGGTCTTGCCCT
TCACGCCCACCGCTGCATGCATTCTGCCTACACACGAAACCCGCGCCATGGGATAAGCATGCTTGTTGTTGCCAAGCTGT
GCAGGCTGATAGGCCTTGACCAGCTCCACATAGGCACTGTTGTCGGGAAAATGCATGGAGAAAAGCATGAAGTCCTTAAC
CTCAGGGACCAGTGCGTGCTCGATAAAGTGCCTGCCGACGAAAGCCAGCATATCCTTGCCCAGGACTGGAGGGGATTAAA
GCCAATGTTCCCTGTAGCATCCGGAGGTCTCGCTCCTACAATGATCCCTGACCTTTATTCTATCTTTGGAAAAGACGTTA
TTATGCAGTTCGGAGGCGGAATTCACGCTCACCCAATGGGCACAGTAGCCGGAGCCACTGCGTGCAGGCAGGCTCTCGAA
GCAAGCCTTGAAGGAATCAGCCTCCAGGACTATGCGAAAAATCATAAAGAACTTGAAACCGCTCTTGGAAAATGGTTGAA
GAAATAA

Upstream 100 bases:

>100_bases
ATTTATGTTCAGTTACTTCCTTCAATCAGAACTACTATTTTTATTTAACAGAATTATGTTCTTGGAATTAATATTCAGTC
AGGAGTAAGGAGAAAACAAA

Downstream 100 bases:

>100_bases
ATTGCTGAGTGTGAAACAGCCTGTATAAGTGGAAATATCGGCAGCACTATTACAGGCTGTGAACCGTGCACAGGTTTTAC
AAACAAAACAATAGCAAAAT

Product: ribulose bisophosphate carboxylase

Products: NA

Alternate protein names: RuBisCO

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRRDYIDIGYSPKETDLVCEFHIEPTAGVNFEEAATHLAGESSIDSWTEIATLSPELAEKLKPHVFYADEGAQTVRVAYS
EELFELGSVPQVLSAVAGNILSMKIVDNVRLQDIAFPKSMINEFKGPNFGLPGIRKLVGVQDRPLIGTIVKPKVGLNSEK
HAEVAYNSFVGGCDLVKDDENLSDQKFNSFEKRAELTLKLAEKAESETGEKKMYLCNVTAPTCREMIRRMNFLKDLGASY
VMVDIVPAGWTAIQTLREEAEDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLDQLHIGTVVGKMHGEKHEVLN
LRDQCVLDKVPADESQHILAQDWRGLKPMFPVASGGLAPTMIPDLYSIFGKDVIMQFGGGIHAHPMGTVAGATACRQALE
ASLEGISLQDYAKNHKELETALGKWLKK

Sequences:

>Translated_428_residues
MRRDYIDIGYSPKETDLVCEFHIEPTAGVNFEEAATHLAGESSIDSWTEIATLSPELAEKLKPHVFYADEGAQTVRVAYS
EELFELGSVPQVLSAVAGNILSMKIVDNVRLQDIAFPKSMINEFKGPNFGLPGIRKLVGVQDRPLIGTIVKPKVGLNSEK
HAEVAYNSFVGGCDLVKDDENLSDQKFNSFEKRAELTLKLAEKAESETGEKKMYLCNVTAPTCREMIRRMNFLKDLGASY
VMVDIVPAGWTAIQTLREEAEDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLDQLHIGTVVGKMHGEKHEVLN
LRDQCVLDKVPADESQHILAQDWRGLKPMFPVASGGLAPTMIPDLYSIFGKDVIMQFGGGIHAHPMGTVAGATACRQALE
ASLEGISLQDYAKNHKELETALGKWLKK
>Mature_428_residues
MRRDYIDIGYSPKETDLVCEFHIEPTAGVNFEEAATHLAGESSIDSWTEIATLSPELAEKLKPHVFYADEGAQTVRVAYS
EELFELGSVPQVLSAVAGNILSMKIVDNVRLQDIAFPKSMINEFKGPNFGLPGIRKLVGVQDRPLIGTIVKPKVGLNSEK
HAEVAYNSFVGGCDLVKDDENLSDQKFNSFEKRAELTLKLAEKAESETGEKKMYLCNVTAPTCREMIRRMNFLKDLGASY
VMVDIVPAGWTAIQTLREEAEDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLDQLHIGTVVGKMHGEKHEVLN
LRDQCVLDKVPADESQHILAQDWRGLKPMFPVASGGLAPTMIPDLYSIFGKDVIMQFGGGIHAHPMGTVAGATACRQALE
ASLEGISLQDYAKNHKELETALGKWLKK

Specific function: Unknown

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type III subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBL_METMA (Q8PXG9)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633273.1
- ProteinModelPortal:   Q8PXG9
- SMR:   Q8PXG9
- GeneID:   1479591
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1249
- NMPDR:   fig|192952.1.peg.1249
- HOGENOM:   HBG405441
- OMA:   HRAMHAA
- ProtClustDB:   PRK04208
- BioCyc:   MMAZ192952:MM1249-MONOMER
- BRENDA:   4.1.1.39
- GO:   GO:0009536
- HAMAP:   MF_01133
- InterPro:   IPR000685
- InterPro:   IPR017443
- InterPro:   IPR017712
- InterPro:   IPR017444
- Gene3D:   G3DSA:3.20.20.110
- Gene3D:   G3DSA:3.30.70.150
- TIGRFAMs:   TIGR03326

Pfam domain/function: PF00016 RuBisCO_large; PF02788 RuBisCO_large_N; SSF51649 RuBisCO_large; SSF54966 RuBisCO_large

EC number: =4.1.1.39

Molecular weight: Translated: 47139; Mature: 47139

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: ACT_SITE 151-151 ACT_SITE 270-270 BINDING 99-99 BINDING 153-153 BINDING 271-271 BINDING 303-303 BINDING 354-354

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDYIDIGYSPKETDLVCEFHIEPTAGVNFEEAATHLAGESSIDSWTEIATLSPELAEK
CCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHC
LKPHVFYADEGAQTVRVAYSEELFELGSVPQVLSAVAGNILSMKIVDNVRLQDIAFPKSM
CCCCEEEECCCCCEEEHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHH
INEFKGPNFGLPGIRKLVGVQDRPLIGTIVKPKVGLNSEKHAEVAYNSFVGGCDLVKDDE
HHHCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEECCCC
NLSDQKFNSFEKRAELTLKLAEKAESETGEKKMYLCNVTAPTCREMIRRMNFLKDLGASY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCE
VMVDIVPAGWTAIQTLREEAEDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLD
EEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
QLHIGTVVGKMHGEKHEVLNLRDQCVLDKVPADESQHILAQDWRGLKPMFPVASGGLAPT
HHHHHHHHHHHCCCHHHHHCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH
MIPDLYSIFGKDVIMQFGGGIHAHPMGTVAGATACRQALEASLEGISLQDYAKNHKELET
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALGKWLKK
HHHHHHCC
>Mature Secondary Structure
MRRDYIDIGYSPKETDLVCEFHIEPTAGVNFEEAATHLAGESSIDSWTEIATLSPELAEK
CCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHC
LKPHVFYADEGAQTVRVAYSEELFELGSVPQVLSAVAGNILSMKIVDNVRLQDIAFPKSM
CCCCEEEECCCCCEEEHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHH
INEFKGPNFGLPGIRKLVGVQDRPLIGTIVKPKVGLNSEKHAEVAYNSFVGGCDLVKDDE
HHHCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEECCCC
NLSDQKFNSFEKRAELTLKLAEKAESETGEKKMYLCNVTAPTCREMIRRMNFLKDLGASY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCE
VMVDIVPAGWTAIQTLREEAEDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLD
EEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
QLHIGTVVGKMHGEKHEVLNLRDQCVLDKVPADESQHILAQDWRGLKPMFPVASGGLAPT
HHHHHHHHHHHCCCHHHHHCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH
MIPDLYSIFGKDVIMQFGGGIHAHPMGTVAGATACRQALEASLEGISLQDYAKNHKELET
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALGKWLKK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12125824