Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227318

Identifier: 21227318

GI number: 21227318

Start: 1438987

End: 1439457

Strand: Direct

Name: 21227318

Synonym: MM_1216

Alternate gene names: NA

Gene position: 1438987-1439457 (Clockwise)

Preceding gene: 21227317

Following gene: 21227320

Centisome position: 35.13

GC content: 40.34

Gene sequence:

>471_bases
TTGGGGTCAGGACTTTTAAAAGAGTTTATAAACAAATCTTTAAATAAATTTATATATGACGAGAAAGCCGTAGACCGTGT
TGTGGTCATTGCCCTCGCGATGATGTGCATAGGACTTCTTGCCCTCATGGGAGGAGGTGTACTCCTCGGAGGAAGTACTG
AAAGAGCCCTGAAATCAGGAACTTTCACACAGCTCGATGTTGAAATACTTGATTCAAAGAGCCTCAAAATAGAACATATG
GGAGGAGACCCTATCAAGCTTGGAGAAAACGCAAACGTATATCTTCAGCATGATGGTATTGAGTATGAAATTACCCCTGA
ACCCCCTGTCACTCTTGAAGTTGCAAATAATATGAAACTGTCCCTGCCGGAAGGAGTAGAACTGAAAGACGGAGATTCGG
CTATAATTACAATAAAAAACGATAGGAGAAACAAAATTATTTACAGAAAAGAGCTTCTTGAGGACTCTTAA

Upstream 100 bases:

>100_bases
AAATTCCCGAGACATATAAAACTTTTTTATACATGAAATGACATAACAATGTTAATAAATTAATAAAGATTTCAAATAAT
TTTCAGGGGATGAATCTACT

Downstream 100 bases:

>100_bases
AACCGAAGAAAGAATTCAGATTGGATAAAGAATTTTTGACATAAGAAGAGCTCTTATGAGATTCAGTTCCTCTTCCTGGC
AGCCTTCACCCATTTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MGSGLLKEFINKSLNKFIYDEKAVDRVVVIALAMMCIGLLALMGGGVLLGGSTERALKSGTFTQLDVEILDSKSLKIEHM
GGDPIKLGENANVYLQHDGIEYEITPEPPVTLEVANNMKLSLPEGVELKDGDSAIITIKNDRRNKIIYRKELLEDS

Sequences:

>Translated_156_residues
MGSGLLKEFINKSLNKFIYDEKAVDRVVVIALAMMCIGLLALMGGGVLLGGSTERALKSGTFTQLDVEILDSKSLKIEHM
GGDPIKLGENANVYLQHDGIEYEITPEPPVTLEVANNMKLSLPEGVELKDGDSAIITIKNDRRNKIIYRKELLEDS
>Mature_155_residues
GSGLLKEFINKSLNKFIYDEKAVDRVVVIALAMMCIGLLALMGGGVLLGGSTERALKSGTFTQLDVEILDSKSLKIEHMG
GDPIKLGENANVYLQHDGIEYEITPEPPVTLEVANNMKLSLPEGVELKDGDSAIITIKNDRRNKIIYRKELLEDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17104; Mature: 16973

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGLLKEFINKSLNKFIYDEKAVDRVVVIALAMMCIGLLALMGGGVLLGGSTERALKSG
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCC
TFTQLDVEILDSKSLKIEHMGGDPIKLGENANVYLQHDGIEYEITPEPPVTLEVANNMKL
CCEEEEEEEECCCCEEEEECCCCCEEECCCCEEEEEECCEEEEECCCCCEEEEECCCEEE
SLPEGVELKDGDSAIITIKNDRRNKIIYRKELLEDS
ECCCCCEEECCCEEEEEEECCCCCEEEHHHHHCCCC
>Mature Secondary Structure 
GSGLLKEFINKSLNKFIYDEKAVDRVVVIALAMMCIGLLALMGGGVLLGGSTERALKSG
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCC
TFTQLDVEILDSKSLKIEHMGGDPIKLGENANVYLQHDGIEYEITPEPPVTLEVANNMKL
CCEEEEEEEECCCCEEEEECCCCCEEECCCCEEEEEECCEEEEECCCCCEEEEECCCEEE
SLPEGVELKDGDSAIITIKNDRRNKIIYRKELLEDS
ECCCCCEEECCCEEEEEEECCCCCEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA