| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227316
Identifier: 21227316
GI number: 21227316
Start: 1436244
End: 1436723
Strand: Reverse
Name: 21227316
Synonym: MM_1214
Alternate gene names: NA
Gene position: 1436723-1436244 (Counterclockwise)
Preceding gene: 21227319
Following gene: 21227315
Centisome position: 35.07
GC content: 40.83
Gene sequence:
>480_bases ATGGAAAAGAGCCTCAAACCAAAAGAGAATGAAAACTTGTCTCAAAAATATATCACGGACGCGGAACGTAAACAGTTTCT GTCTGCTCTACACTGCCGCCTCTTCTGGGTAGGACAATATATCCCGGATTATGTGGAGTTCAAGGGAAAGAGGCACCCGC TCCATAACTATGTGTGGGAACTGATTCAGAAAGAGAAGCTTACTGAAGGCGAAAAGTCCCGGATAAACAAATGCATCGAT ATTATTTCAGTGAAAGAGAAAGAGAATGAAAAGAAATTGGAAGAGAAACCTCTCACAGAGGAAGAGGCAAAATCCCTGTA TCATGAGACTGCAGGTTTGTTGCGCGCAATAACAGACCTTAAAGAAATTGAAAGTGGTGAATTTAAAGAGAGCACAAGAC GTTTTCAGGAAAAGTTTAATGAACAGAGAGTTAAGGATGCCAAGCTCTGGCTTGAATTCCTCAGAAATGTATCAAAGTAA
Upstream 100 bases:
>100_bases CTTTTGTTTTCGAAGTTTCATCTTTGAAATCGAAAGTCTGACGTTAAAAGGTTGACACAAAAATTTTTGATTTGGGAGAA CCATTAGTCCTGAGGATAGT
Downstream 100 bases:
>100_bases AACCGCGCAGCACCGAGTCTAATCAGGGATTAATTGCTGCAGTATTCCATGGGAAATTTTCAGAGCAAAGATTATATCCC TGTGCACCATTTATGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEKSLKPKENENLSQKYITDAERKQFLSALHCRLFWVGQYIPDYVEFKGKRHPLHNYVWELIQKEKLTEGEKSRINKCID IISVKEKENEKKLEEKPLTEEEAKSLYHETAGLLRAITDLKEIESGEFKESTRRFQEKFNEQRVKDAKLWLEFLRNVSK
Sequences:
>Translated_159_residues MEKSLKPKENENLSQKYITDAERKQFLSALHCRLFWVGQYIPDYVEFKGKRHPLHNYVWELIQKEKLTEGEKSRINKCID IISVKEKENEKKLEEKPLTEEEAKSLYHETAGLLRAITDLKEIESGEFKESTRRFQEKFNEQRVKDAKLWLEFLRNVSK >Mature_159_residues MEKSLKPKENENLSQKYITDAERKQFLSALHCRLFWVGQYIPDYVEFKGKRHPLHNYVWELIQKEKLTEGEKSRINKCID IISVKEKENEKKLEEKPLTEEEAKSLYHETAGLLRAITDLKEIESGEFKESTRRFQEKFNEQRVKDAKLWLEFLRNVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19061; Mature: 19061
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSLKPKENENLSQKYITDAERKQFLSALHCRLFWVGQYIPDYVEFKGKRHPLHNYVWE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LIQKEKLTEGEKSRINKCIDIISVKEKENEKKLEEKPLTEEEAKSLYHETAGLLRAITDL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KEIESGEFKESTRRFQEKFNEQRVKDAKLWLEFLRNVSK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKSLKPKENENLSQKYITDAERKQFLSALHCRLFWVGQYIPDYVEFKGKRHPLHNYVWE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LIQKEKLTEGEKSRINKCIDIISVKEKENEKKLEEKPLTEEEAKSLYHETAGLLRAITDL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KEIESGEFKESTRRFQEKFNEQRVKDAKLWLEFLRNVSK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA