| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227196
Identifier: 21227196
GI number: 21227196
Start: 1288279
End: 1288641
Strand: Direct
Name: 21227196
Synonym: MM_1094
Alternate gene names: NA
Gene position: 1288279-1288641 (Clockwise)
Preceding gene: 21227195
Following gene: 21227197
Centisome position: 31.45
GC content: 39.67
Gene sequence:
>363_bases ATGATAGATTTTGCCTGCAAAGAGTTCAAAGTAGAGGATGTAATCAAGTGCGCCCTCAACCTTACAAAAGCTGATCTGAA TGTTATGAAGTCATTCTTAAATGAACCTGACAGATGGATTGATACTGATGCCCTTTCAAAATCTCTGAAACTTGATGTTT CTACAGTCCAGCGCTCCGTAAAAAAGCTGCATGAGAAAGAGATCCTTCAGAGATCGCAGCAAAACCTTGACGGAGGGGGC TATGTTTACATTTATAAAATATATTCAAAAAACCAGATAAGGAATATCATTCAAAAAATCGTCCAGTCCTGGGCTGATAG ACTCGGACAGGAACTGAAAGAATGGGAAAACGGAGGCGAATAA
Upstream 100 bases:
>100_bases ATATAGTACTTCAGTTTTTTAGCTTTATTTTGCAGTACTTGCCAGTATATAAGTACTACGGACAGAATAATACAGTACTG CAAAATAAAAGAGGGATTGA
Downstream 100 bases:
>100_bases AATACTCAAAATCACACCCTACCTGGGAATACTTGTACTGATCGTTTCTATCGGCGGACTCTGGTATCCTGCACTCGGCT ACTTTATGCTGCTGATCTTT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQQNLDGGG YVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE
Sequences:
>Translated_120_residues MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQQNLDGGG YVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE >Mature_120_residues MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQQNLDGGG YVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE
Specific function: Unknown
COG id: COG3355
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13951; Mature: 13951
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KKLHEKEILQRSQQNLDGGGYVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KKLHEKEILQRSQQNLDGGGYVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA